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Report for CCDS10229.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10229.2 Public Homo sapiens 15 CORO2B 24 110 108 CCDS HistoryNCBI Gene:10391Re-query CCDS DB by CCDS ID:10229.2Re-query CCDS DB by GeneID:10391See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10229.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261861.10 ENSP00000261861.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261861.10Link to Ensembl Protein Viewer:ENSP00000261861.6Re-query CCDS DB by Nucleotide ID:ENST00000261861Re-query CCDS DB by Protein ID:ENSP00000261861
Original member Current member NCBI NM_006091.5 NP_006082.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006091.5Link to Protein Sequence:NP_006082.3Re-query CCDS DB by Nucleotide ID:NM_006091Re-query CCDS DB by Protein ID:NP_006082Link to BLAST:NP_006082.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006082.3 480 Q9UQ03-1 480 100% 0 0

Chromosomal Locations for CCDS 10229.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 68579263 68579277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68645160 68645360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68695140 68695256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68710732 68710881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68711542 68711706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68713925 68714041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68714559 68714663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68715215 68715311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68718698 68718810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68719144 68719234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68719413 68719552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68725843 68725974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1443 nt):
ATGACTGTCACAAAGATGTCCTGGCGTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCTACGGGAAGG
TGGCCAACCGGGAGCACTGCTTCGATGGGATCCCCATCACCAAGAATGTGCACGACAACCACTTCTGTGC
CGTCAACACCCGCTTCCTGGCCATCGTCACCGAGAGCGCAGGGGGCGGCTCCTTCCTCGTCATCCCCCTG
GAGCAGACAGGCAGGATTGAACCCAACTACCCCAAGGTCTGCGGCCACCAGGGCAATGTGCTGGATATCA
AATGGAACCCCTTCATCGACAACATCATTGCCTCGTGCTCGGAGGACACGTCGGTGCGGATCTGGGAGAT
CCCCGAGGGCGGGCTGAAGCGGAACATGACGGAGGCGCTCCTGGAGCTGCACGGGCACAGCCGGCGTGTG
GGGCTGGTCGAGTGGCACCCCACCACCAACAACATCCTGTTCAGCGCTGGCTACGACTACAAGGTCCTCA
TCTGGAACCTGGATGTGGGTGAGCCGGTGAAGATGATTGACTGCCACACGGATGTGATCCTCTGCATGTC
CTTCAACACGGACGGCAGCCTGCTCACCACCACGTGCAAGGACAAGAAGCTGCGTGTGATTGAGCCCCGC
TCTGGCCGTGTTCTGCAGGAGGCCAACTGCAAAAACCACAGAGTGAACCGGGTGGTGTTCCTGGGGAACA
TGAAGCGGCTCCTCACGACAGGGGTCTCCAGGTGGAACACAAGACAGATTGCCCTCTGGGACCAGGAGGA
CCTCTCCATGCCCCTGATCGAAGAGGAAATTGATGGGCTCTCTGGCCTCCTGTTCCCCTTCTATGATGCT
GACACCCACATGCTCTACCTGGCTGGAAAGGGTGATGGAAACATCCGGTACTACGAGATCAGCACTGAGA
AGCCCTACCTGAGTTACCTCATGGAGTTCCGCTCCCCAGCCCCGCAGAAAGGCCTAGGGGTCATGCCCAA
GCACGGGCTGGATGTGTCAGCCTGCGAGGTGTTCCGCTTCTACAAGCTGGTGACTCTCAAGGGCCTGATC
GAGCCCATCTCCATGATCGTGCCCCGGAGGTCAGATTCCTACCAGGAAGACATTTACCCAATGACACCAG
GCACGGAGCCAGCACTGACCCCGGATGAATGGCTGGGAGGCATCAACCGAGATCCCGTGCTGATGTCTTT
GAAAGAAGGCTATAAGAAGTCCTCAAAAATGGTATTTAAGGCTCCCATCAAAGAAAAGAAGAGTGTTGTG
GTCAACGGAATAGATTTATTAGAAAATGTCCCACCCAGGACAGAGAATGAGCTCCTTCGAATGTTCTTCC
GGCAGCAGGATGAGATTCGACGGTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCATTCGGCAGCTCCA
GCTGGAACTGAAAAACTTGCGCAACAGCCCCAAGAACTGTTAG

Translation (480 aa):
MTVTKMSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLVIPL
EQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRV
GLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKLRVIEPR
SGRVLQEANCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDA
DTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLI
EPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVV
VNGIDLLENVPPRTENELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLRNSPKNC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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