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Report for CCDS10313.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10313.1 Public Homo sapiens 15 ZFAND6 24 110 108 CCDS HistoryNCBI Gene:54469Re-query CCDS DB by CCDS ID:10313.1Re-query CCDS DB by GeneID:54469See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10313.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261749.11 ENSP00000261749.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261749.11Link to Ensembl Protein Viewer:ENSP00000261749.6Re-query CCDS DB by Nucleotide ID:ENST00000261749Re-query CCDS DB by Protein ID:ENSP00000261749
Original member Current member EBI ENST00000561060.5 ENSP00000452735.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561060.5Link to Ensembl Protein Viewer:ENSP00000452735.1Re-query CCDS DB by Nucleotide ID:ENST00000561060Re-query CCDS DB by Protein ID:ENSP00000452735
Original member Current member EBI ENST00000559835.5 ENSP00000453291.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559835.5Link to Ensembl Protein Viewer:ENSP00000453291.1Re-query CCDS DB by Nucleotide ID:ENST00000559835Re-query CCDS DB by Protein ID:ENSP00000453291
Original member Current member EBI ENST00000559775.5 ENSP00000453709.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559775.5Link to Ensembl Protein Viewer:ENSP00000453709.1Re-query CCDS DB by Nucleotide ID:ENST00000559775Re-query CCDS DB by Protein ID:ENSP00000453709
Original member Current member EBI ENST00000558087.5 ENSP00000453888.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000558087.5Link to Ensembl Protein Viewer:ENSP00000453888.1Re-query CCDS DB by Nucleotide ID:ENST00000558087Re-query CCDS DB by Protein ID:ENSP00000453888
Original member Current member EBI ENST00000558494.5 ENSP00000454137.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000558494.5Link to Ensembl Protein Viewer:ENSP00000454137.1Re-query CCDS DB by Nucleotide ID:ENST00000558494Re-query CCDS DB by Protein ID:ENSP00000454137
Original member Current member EBI ENST00000616533.4 ENSP00000478129.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616533.4Link to Ensembl Protein Viewer:ENSP00000478129.1Re-query CCDS DB by Nucleotide ID:ENST00000616533Re-query CCDS DB by Protein ID:ENSP00000478129
Original member Current member EBI ENST00000613266.4 ENSP00000479071.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613266.4Link to Ensembl Protein Viewer:ENSP00000479071.1Re-query CCDS DB by Nucleotide ID:ENST00000613266Re-query CCDS DB by Protein ID:ENSP00000479071
Original member Current member EBI ENST00000618205.4 ENSP00000484971.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618205.4Link to Ensembl Protein Viewer:ENSP00000484971.1Re-query CCDS DB by Nucleotide ID:ENST00000618205Re-query CCDS DB by Protein ID:ENSP00000484971
Original member Current member NCBI NM_001242911.2 NP_001229840.1 Accepted alive Link to Nucleotide Sequence:NM_001242911.2Link to Protein Sequence:NP_001229840.1Re-query CCDS DB by Nucleotide ID:NM_001242911Re-query CCDS DB by Protein ID:NP_001229840Link to BLAST:NP_001229840.1
Original member Current member NCBI NM_001242912.2 NP_001229841.1 Accepted alive Link to Nucleotide Sequence:NM_001242912.2Link to Protein Sequence:NP_001229841.1Re-query CCDS DB by Nucleotide ID:NM_001242912Re-query CCDS DB by Protein ID:NP_001229841Link to BLAST:NP_001229841.1
Original member Current member NCBI NM_001242913.2 NP_001229842.1 Accepted alive Link to Nucleotide Sequence:NM_001242913.2Link to Protein Sequence:NP_001229842.1Re-query CCDS DB by Nucleotide ID:NM_001242913Re-query CCDS DB by Protein ID:NP_001229842Link to BLAST:NP_001229842.1
Original member Current member NCBI NM_001242914.2 NP_001229843.1 Accepted alive Link to Nucleotide Sequence:NM_001242914.2Link to Protein Sequence:NP_001229843.1Re-query CCDS DB by Nucleotide ID:NM_001242914Re-query CCDS DB by Protein ID:NP_001229843Link to BLAST:NP_001229843.1
Original member Current member NCBI NM_001242915.2 NP_001229844.1 Accepted alive Link to Nucleotide Sequence:NM_001242915.2Link to Protein Sequence:NP_001229844.1Re-query CCDS DB by Nucleotide ID:NM_001242915Re-query CCDS DB by Protein ID:NP_001229844Link to BLAST:NP_001229844.1
Original member Current member NCBI NM_001242916.2 NP_001229845.1 Accepted alive Link to Nucleotide Sequence:NM_001242916.2Link to Protein Sequence:NP_001229845.1Re-query CCDS DB by Nucleotide ID:NM_001242916Re-query CCDS DB by Protein ID:NP_001229845Link to BLAST:NP_001229845.1
Original member Current member NCBI NM_019006.4 NP_061879.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019006.4Link to Protein Sequence:NP_061879.2Re-query CCDS DB by Nucleotide ID:NM_019006Re-query CCDS DB by Protein ID:NP_061879Link to BLAST:NP_061879.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229840.1 208 Q6FIF0-1 208 100% 0 0
NP_001229841.1 208 Q6FIF0-1 208 100% 0 0
NP_001229842.1 208 Q6FIF0-1 208 100% 0 0
NP_001229843.1 208 Q6FIF0-1 208 100% 0 0
NP_001229844.1 208 Q6FIF0-1 208 100% 0 0
NP_001229845.1 208 Q6FIF0-1 208 100% 0 0
NP_061879.2 208 Q6FIF0-1 208 100% 0 0

Chromosomal Locations for CCDS 10313.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 80120345 80120498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80121712 80121820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80122700 80122800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80131180 80131293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80137480 80137628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGGCTCAAGAAACTAATCACAGCCAAGTGCCTATGCTTTGTTCCACTGGCTGTGGATTTTATGGAAACC
CTCGTACAAATGGCATGTGTTCAGTATGCTATAAAGAACATCTTCAAAGACAGAATAGTAGTAATGGTAG
AATAAGCCCACCTGCAACCTCTGTCAGTAGTCTGTCTGAATCTTTACCAGTTCAATGCACAGATGGCAGT
GTGCCAGAAGCCCAGTCAGCATTAGACTCTACATCTTCATCTATGCAGCCCAGCCCTGTATCAAATCAGT
CACTTTTATCAGAATCTGTAGCATCTTCTCAATTGGACAGTACATCTGTGGACAAAGCAGTACCTGAAAC
AGAAGATGTGCAGGCTTCAGTATCAGACACAGCACAGCAGCCATCTGAAGAGCAAAGCAAGTCTCTTGAA
AAACCGAAACAAAAAAAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTACTGGGTTTGAATGCC
GGTGTGGAAATGTTTACTGTGGTGTACACCGTTACTCAGATGTACACAATTGCTCTTACAATTACAAAGC
CGATGCTGCTGAGAAAATCAGAAAAGAAAATCCAGTAGTTGTTGGTGAAAAGATCCAAAAGATTTGA

Translation (208 aa):
MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGS
VPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLE
KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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