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Report for CCDS10324.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10324.1 Public Homo sapiens 15 BNC1 24 110 108 CCDS HistoryNCBI Gene:646Re-query CCDS DB by CCDS ID:10324.1Re-query CCDS DB by GeneID:646See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10324.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345382.7 ENSP00000307041.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000345382.7Link to Ensembl Protein Viewer:ENSP00000307041.2Re-query CCDS DB by Nucleotide ID:ENST00000345382Re-query CCDS DB by Protein ID:ENSP00000307041
Original member Current member NCBI NM_001717.4 NP_001708.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001717.4Link to Protein Sequence:NP_001708.3Re-query CCDS DB by Nucleotide ID:NM_001717Re-query CCDS DB by Protein ID:NP_001708Link to BLAST:NP_001708.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001708.3 994 Q01954 994 100% 0 0

Chromosomal Locations for CCDS 10324.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 83257442 83258126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83262951 83264815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83266836 83267071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83268133 83268232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83284530 83284628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2985 nt):
ATGCGGCGGCGCCCGCCGAGCCGGGGCGGACGCGGGGCGGCCCGGGCCCGGGAGACGCGCCGGCAGCCCC
GGCACCGCAGCGGTCGCAGGATGGCCGAGGCTATCAGCTGTACTCTGAACTGTAGTTGCCAAAGTTTCAA
ACCCGGGAAAATAAACCACCGTCAGTGTGACCAATGCAAGCATGGATGGGTGGCCCACGCTCTAAGTAAG
CTAAGGATCCCCCCCATGTATCCAACAAGCCAGGTGGAGATTGTCCAGTCCAATGTAGTGTTTGATATTA
GCAGCCTCATGCTCTATGGGACCCAGGCCATCCCCGTTCGCCTAAAAATCCTACTGGACCGGCTCTTCAG
TGTGTTGAAGCAAGATGAGGTTCTCCAGATCCTCCATGCCTTGGACTGGACACTTCAGGATTATATCCGT
GGATACGTACTGCAGGATGCATCAGGAAAGGTGTTGGATCACTGGAGCATCATGACCAGTGAGGAAGAAG
TGGCCACCTTGCAGCAGTTCCTTCGTTTTGGAGAGACCAAATCTATAGTTGAACTCATGGCAATTCAAGA
GAAAGAAGAGCAATCCATCATCATACCACCTTCCACAGCAAATGTAGATATCAGGGCTTTCATCGAGAGC
TGCAGTCACAGGAGTTCTAGCCTCCCCACTCCTGTGGACAAAGGAAACCCCAGCAGTATACACCCCTTTG
AGAACCTCATAAGCAACATGACTTTCATGCTGCCTTTCCAGTTCTTCAACCCTCTGCCTCCTGCACTGAT
AGGGTCATTGCCCGAACAATATATGTTGGAGCAGGGTCATGACCAAAGTCAGGACCCCAAACAGGAAGTC
CATGGGCCCTTCCCTGACAGCAGCTTCTTAACTTCCAGTTCCACACCATTTCAGGTTGAAAAAGATCAGT
GTTTAAACTGTCCGGATGCTATTACTAAAAAAGAAGACAGCACCCATTTAAGTGACTCCAGCTCATACAA
CATTGTCACTAAGTTTGAAAGGACACAGTTATCCCCTGAGGCCAAAGTGAAGCCTGAGAGGAATAGCCTT
GGTACAAAGAAGGGCCGGGTGTTCTGCACTGCATGTGAGAAGACCTTCTATGACAAAGGCACCCTCAAAA
TCCACTACAATGCCGTCCACTTGAAGATCAAGCATAAGTGCACCATCGAAGGGTGTAACATGGTGTTCAG
CTCCCTAAGGAGCCGGAATCGCCATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAAT
AACCGGGACAAAGACCTCAGGAACAGCCTGAACCTGGCCAGCTCTGAGAACTACAAGTGCCCAGGTTTCA
CAGTGACGTCCCCAGACTGTAGGCCTCCTCCCAGCTACCCTGGTTCAGGAGAGGATTCCAAAGGCCAACC
AGCCTTCCCAAACATTGGGCAAAATGGTGTGCTTTTTCCCAACCTAAAGACAGTCCAGCCAGTCCTTCCT
TTCTACCGCAGTCCAGCCACGCCTGCCGAGGTAGCAAACACGCCTGGGATACTCCCTTCCCTCCCGCTGT
TGTCCTCTTCAATCCCAGAACAGCTCATTTCAAACGAAATGCCATTTGATGCCCTTCCCAAGAAGAAATC
CAGGAAGTCCAGTATGCCTATCAAAATAGAGAAAGAAGCTGTGGAAATAGCTAATGAGAAAAGACACAAC
CTCAGCTCAGATGAAGACATGCCCCTACAGGTGGTCAGTGAAGATGAGCAGGAGGCCTGCAGTCCTCAGT
CACACAGAGTATCTGAGGAGCAGCATGTACAGTCAGGAGGCTTAGGGAAGCCTTTCCCTGAAGGGGAGAG
GCCCTGCCATCGTGAATCAGTAATTGAGTCCAGTGGAGCCATCAGCCAAACCCCTGAGCAGGCCACACAC
AATTCAGAGAGGGAGACTGAGCAGACACCAGCATTGATCATGGTGCCAAGGGAGGTCGAGGATGGTGGCC
ATGAACACTACTTCACACCTGGGATGGAACCCCAAGTTCCTTTTTCTGACTACATGGAACTGCAGCAGCG
CCTGCTGGCTGGGGGACTCTTCAGTGCTTTGTCCAACAGGGGAATGGCTTTTCCTTGTCTTGAAGATTCT
AAAGAACTGGAGCACGTGGGTCAGCATGCATTAGCAAGGCAGATAGAAGAAAATCGCTTCCAGTGTGACA
TCTGCAAGAAGACCTTTAAAAATGCTTGTAGTGTGAAAATTCATCACAAGAATATGCATGTCAAAGAAAT
GCACACATGCACAGTGGAGGGCTGTAATGCTACCTTTCCCTCCCGCAGGAGCAGAGACAGACACAGCTCA
AACCTAAACCTCCACCAAAAAGCATTGAGCCAGGAAGCATTGGAGAGTAGTGAAGATCATTTCCGTGCAG
CTTACCTTCTGAAAGATGTGGCTAAGGAAGCCTATCAGGATGTGGCTTTTACACAGCAAGCCTCCCAGAC
ATCTGTCATCTTCAAAGGAACAAGTCGAATGGGCAGTCTGGTTTACCCAATAACGCAAGTCCACAGTGCC
AGCCTGGAGAGCTACAACTCTGGCCCCTTGAGCGAGGGCACCATCCTGGATTTGAGCACTACCTCGAGCA
TGAAGTCAGAGAGTAGCAGCCATTCTTCCTGGGACTCTGACGGGGTGAGTGAGGAAGGCACTGTGCTTAT
GGAGGACAGTGATGGGAACTGTGAAGGGTCGAGCCTTGTCCCTGGGGAAGATGAGTACCCCATCTGTGTC
CTGATGGAGAAGGCTGACCAGAGCCTTGCTAGCCTGCCTTCTGGGTTGCCCATAACCTGTCATCTCTGCC
AAAAGACATACAGTAACAAAGGGACCTTTAGGGCCCACTACAAAACTGTGCACCTCCGGCAGCTCCACAA
ATGCAAAGTACCAGGCTGCAACACCATGTTTTCGTCTGTTCGCAGTCGAAACAGACACAGCCAGAATCCC
AACCTGCACAAAAGCCTGGCCTCATCTCCAAGTCACCTCCAGTAA

Translation (994 aa):
MRRRPPSRGGRGAARARETRRQPRHRSGRRMAEAISCTLNCSCQSFKPGKINHRQCDQCKHGWVAHALSK
LRIPPMYPTSQVEIVQSNVVFDISSLMLYGTQAIPVRLKILLDRLFSVLKQDEVLQILHALDWTLQDYIR
GYVLQDASGKVLDHWSIMTSEEEVATLQQFLRFGETKSIVELMAIQEKEEQSIIIPPSTANVDIRAFIES
CSHRSSSLPTPVDKGNPSSIHPFENLISNMTFMLPFQFFNPLPPALIGSLPEQYMLEQGHDQSQDPKQEV
HGPFPDSSFLTSSSTPFQVEKDQCLNCPDAITKKEDSTHLSDSSSYNIVTKFERTQLSPEAKVKPERNSL
GTKKGRVFCTACEKTFYDKGTLKIHYNAVHLKIKHKCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMNRN
NRDKDLRNSLNLASSENYKCPGFTVTSPDCRPPPSYPGSGEDSKGQPAFPNIGQNGVLFPNLKTVQPVLP
FYRSPATPAEVANTPGILPSLPLLSSSIPEQLISNEMPFDALPKKKSRKSSMPIKIEKEAVEIANEKRHN
LSSDEDMPLQVVSEDEQEACSPQSHRVSEEQHVQSGGLGKPFPEGERPCHRESVIESSGAISQTPEQATH
NSERETEQTPALIMVPREVEDGGHEHYFTPGMEPQVPFSDYMELQQRLLAGGLFSALSNRGMAFPCLEDS
KELEHVGQHALARQIEENRFQCDICKKTFKNACSVKIHHKNMHVKEMHTCTVEGCNATFPSRRSRDRHSS
NLNLHQKALSQEALESSEDHFRAAYLLKDVAKEAYQDVAFTQQASQTSVIFKGTSRMGSLVYPITQVHSA
SLESYNSGPLSEGTILDLSTTSSMKSESSSHSSWDSDGVSEEGTVLMEDSDGNCEGSSLVPGEDEYPICV
LMEKADQSLASLPSGLPITCHLCQKTYSNKGTFRAHYKTVHLRQLHKCKVPGCNTMFSSVRSRNRHSQNP
NLHKSLASSPSHLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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