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Report for CCDS10421.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10421.1 Public Homo sapiens 16 FBXL16 24 110 108 CCDS HistoryNCBI Gene:146330Re-query CCDS DB by CCDS ID:10421.1Re-query CCDS DB by GeneID:146330See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10421.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324361.9 ENSP00000318674.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324361.9Link to Ensembl Protein Viewer:ENSP00000318674.5Re-query CCDS DB by Nucleotide ID:ENST00000324361Re-query CCDS DB by Protein ID:ENSP00000318674
Original member Current member EBI ENST00000397621.6 ENSP00000380746.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397621.6Link to Ensembl Protein Viewer:ENSP00000380746.1Re-query CCDS DB by Nucleotide ID:ENST00000397621Re-query CCDS DB by Protein ID:ENSP00000380746
Original member Current member NCBI NM_153350.4 NP_699181.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153350.4Link to Protein Sequence:NP_699181.2Re-query CCDS DB by Nucleotide ID:NM_153350Re-query CCDS DB by Protein ID:NP_699181Link to BLAST:NP_699181.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699181.2 479 Q8N461-1 479 100% 0 0

Chromosomal Locations for CCDS 10421.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 694275 694423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 694634 694697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 694992 695076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 695415 695923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 696773 697405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1440 nt):
ATGTCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAACGGTCTGGTGAAGCTGC
CGGGCCAGCCCAACGGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCACCAAGAACCGCCCCTG
CCAGCCACCACCCCCACCCACCCTCCCACCACCCAGCCTGGCTGCTCCACTGTCCCGGGCTGCCCTGGCT
GGGGGCCCGTGCACCCCGGCAGGTGGACCAGCCTCAGCCTTGGCACCTGGGCACCCAGCGGAGCGGCCGC
CGCTGGCCACGGACGAGAAGATCCTCAATGGGCTCTTCTGGTATTTCTCGGCCTGCGAGAAGTGTGTGCT
GGCCCAGGTGTGCAAGGCCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTG
CTGCATGCCAAGGAGCTCTACAACGTGCTGCCTGGTGGCGAGAAGGAGTTCGTGAACCTGCAGGGTTTTG
CCGCCAGAGGCTTCGAGGGCTTCTGCCTGGTTGGCGTCTCCGACCTGGACATCTGTGAGTTCATTGACAA
CTATGCGCTCTCCAAGAAGGGTGTCAAAGCCATGAGCCTCAAGCGCTCCACCATCACGGACGCAGGCCTC
GAGGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCTGGAGCTGTCGGGCTGCAACGACTTCACCGAGG
CCGGGCTGTGGTCCAGCCTGAGCGCGCGCATCACCTCGCTGAGCGTGAGTGACTGCATCAACGTGGCCGA
CGACGCCATCGCGGCCATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGAGCCTGCAGGCCTACCACGTG
ACGGACACGGCGCTGGCCTACTTCACGGCGCGCCAGGGCCACAGCACGCACACGCTGCGCCTGCTCTCCT
GCTGGGAGATCACCAACCACGGCGTGGTCAACGTGGTGCACAGCCTGCCCAACCTCACCGCGCTCAGCCT
CTCGGGCTGCTCCAAGGTCACCGACGACGGCGTGGAGCTCGTGGCCGAGAACCTGCGCAAGCTGCGCAGC
CTTGACCTCTCGTGGTGCCCACGCATCACCGACATGGCGCTGGAGTACGTGGCCTGCGACCTGCACCGCC
TAGAGGAGCTCGTGCTCGACAGGTGTGTACGCATCACGGACACTGGCCTCAGCTATCTGTCCACCATGTC
GTCCCTCCGCAGCCTCTACCTGCGATGGTGCTGCCAGGTGCAAGACTTCGGGCTGAAGCACCTCCTGGCC
CTGGGGAGTTTGCGCCTCCTGTCTCTGGCAGGCTGCCCGCTGCTCACCACCACCGGGCTGTCGGGCCTGG
TGCAGCTGCAGGAGCTGGAGGAGCTGGAGCTGACCAACTGCCCCGGGGCCACCCCCGAGCTCTTCAAGTA
TTTCTCGCAGCACCTGCCCCGCTGCCTCGTCATTGAGTAG

Translation (479 aa):
MSSPGIDGDPKPPCLPRNGLVKLPGQPNGLGAASITKGTPATKNRPCQPPPPPTLPPPSLAAPLSRAALA
GGPCTPAGGPASALAPGHPAERPPLATDEKILNGLFWYFSACEKCVLAQVCKAWRRVLYQPKFWAGLTPV
LHAKELYNVLPGGEKEFVNLQGFAARGFEGFCLVGVSDLDICEFIDNYALSKKGVKAMSLKRSTITDAGL
EVMLEQMQGVVRLELSGCNDFTEAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHV
TDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRS
LDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLA
LGSLRLLSLAGCPLLTTTGLSGLVQLQELEELELTNCPGATPELFKYFSQHLPRCLVIE


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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