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Report for CCDS10581.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10581.1 Public Homo sapiens 16 GPRC5B 24 110 108 CCDS HistoryNCBI Gene:51704Re-query CCDS DB by CCDS ID:10581.1Re-query CCDS DB by GeneID:51704See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10581.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300571.7 ENSP00000300571.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300571.7Link to Ensembl Protein Viewer:ENSP00000300571.2Re-query CCDS DB by Nucleotide ID:ENST00000300571Re-query CCDS DB by Protein ID:ENSP00000300571
Original member Current member EBI ENST00000569479.5 ENSP00000454727.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569479.5Link to Ensembl Protein Viewer:ENSP00000454727.1Re-query CCDS DB by Nucleotide ID:ENST00000569479Re-query CCDS DB by Protein ID:ENSP00000454727
Original member Current member EBI ENST00000569847.1 ENSP00000457283.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569847.1Link to Ensembl Protein Viewer:ENSP00000457283.1Re-query CCDS DB by Nucleotide ID:ENST00000569847Re-query CCDS DB by Protein ID:ENSP00000457283
Original member Current member NCBI NM_016235.3 NP_057319.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016235.3Link to Protein Sequence:NP_057319.1Re-query CCDS DB by Nucleotide ID:NM_016235Re-query CCDS DB by Protein ID:NP_057319Link to BLAST:NP_057319.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057319.1 403 Q9NZH0-1 403 100% 0 0

Chromosomal Locations for CCDS 10581.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 19860500 19860544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19861837 19861973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19871816 19872845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGTTCGTGGCATCAGAGAGAAAGATGAGAGCTCACCAGGTGCTCACCTTCCTCCTGCTCTTCGTGATCA
CCTCGGTGGCCTCTGAAAACGCCAGCACATCCCGAGGCTGTGGGCTGGACCTCCTCCCTCAGTACGTGTC
CCTGTGCGACCTGGACGCCATCTGGGGCATTGTGGTGGAGGCGGTGGCCGGGGCGGGCGCCCTGATCACA
CTGCTCCTGATGCTCATCCTCCTGGTGCGGCTGCCCTTCATCAAGGAGAAGGAGAAGAAGAGCCCTGTGG
GCCTCCACTTTCTGTTCCTCCTGGGGACCCTGGGCCTCTTTGGGCTGACGTTTGCCTTCATCATCCAGGA
GGACGAGACCATCTGCTCTGTCCGCCGCTTCCTCTGGGGCGTCCTCTTTGCGCTCTGCTTCTCCTGCCTG
CTGAGCCAGGCATGGCGCGTGCGGAGGCTGGTGCGGCATGGCACGGGCCCCGCGGGCTGGCAGCTGGTGG
GCCTGGCGCTGTGCCTGATGCTGGTGCAAGTCATCATCGCTGTGGAGTGGCTGGTGCTCACCGTGCTGCG
TGACACAAGGCCAGCCTGCGCCTACGAGCCCATGGACTTTGTGATGGCCCTCATCTACGACATGGTACTG
CTTGTGGTCACCCTGGGGCTGGCCCTCTTCACTCTGTGCGGCAAGTTCAAGAGGTGGAAGCTGAACGGGG
CCTTCCTCCTCATCACAGCCTTCCTCTCTGTGCTCATCTGGGTGGCCTGGATGACCATGTACCTCTTCGG
CAATGTCAAGCTGCAGCAGGGGGATGCCTGGAACGACCCCACCTTGGCCATCACGCTGGCGGCCAGCGGC
TGGGTCTTCGTCATCTTCCACGCCATCCCTGAGATCCACTGCACCCTTCTGCCAGCCCTGCAGGAGAACA
CGCCCAACTACTTCGACACGTCGCAGCCCAGGATGCGGGAGACGGCCTTCGAGGAGGACGTGCAGCTGCC
GCGGGCCTATATGGAGAACAAGGCCTTCTCCATGGATGAACACAATGCAGCTCTCCGAACAGCAGGATTT
CCCAACGGCAGCTTGGGAAAAAGACCCAGTGGCAGCTTGGGGAAAAGACCCAGCGCTCCGTTTAGAAGCA
ACGTGTATCAGCCAACTGAGATGGCCGTCGTGCTCAACGGTGGGACCATCCCAACTGCTCCGCCAAGTCA
CACAGGAAGACACCTTTGGTGA

Translation (403 aa):
MFVASERKMRAHQVLTFLLLFVITSVASENASTSRGCGLDLLPQYVSLCDLDAIWGIVVEAVAGAGALIT
LLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLFALCFSCL
LSQAWRVRRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDTRPACAYEPMDFVMALIYDMVL
LVVTLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASG
WVFVIFHAIPEIHCTLLPALQENTPNYFDTSQPRMRETAFEEDVQLPRAYMENKAFSMDEHNAALRTAGF
PNGSLGKRPSGSLGKRPSAPFRSNVYQPTEMAVVLNGGTIPTAPPSHTGRHLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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