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Report for CCDS10621.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10621.1 Public Homo sapiens 16 RBBP6 24 110 108 CCDS HistoryNCBI Gene:5930Re-query CCDS DB by CCDS ID:10621.1Re-query CCDS DB by GeneID:5930See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10621.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319715.10 ENSP00000317872.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319715.10Link to Ensembl Protein Viewer:ENSP00000317872.4Re-query CCDS DB by Nucleotide ID:ENST00000319715Re-query CCDS DB by Protein ID:ENSP00000317872
Original member Current member NCBI NM_006910.5 NP_008841.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006910.5Link to Protein Sequence:NP_008841.2Re-query CCDS DB by Nucleotide ID:NM_006910Re-query CCDS DB by Protein ID:NP_008841Link to BLAST:NP_008841.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008841.2 1792 Q7Z6E9-1 1792 100% 0 0

Chromosomal Locations for CCDS 10621.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 24540627 24540792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24546163 24546262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24548945 24548981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24553513 24553557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24555615 24555703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24555821 24555917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24556308 24556447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24559505 24559677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24561612 24561715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24561824 24562161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24563199 24563295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24563423 24563501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24563610 24563664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24564797 24564865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24567143 24567505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24567792 24567893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24568745 24570499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24570876 24572445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5379 nt):
ATGTCCTGTGTGCATTATAAATTTTCCTCTAAACTCAACTATGATACCGTCACCTTTGATGGGCTCCACA
TCTCCCTCTGCGACTTAAAGAAGCAGATTATGGGGAGAGAGAAGCTGAAAGCTGCCGACTGCGACCTGCA
GATCACCAATGCGCAGACGAAAGAAGAATATACTGATGATAATGCTCTGATTCCTAAGAATTCTTCTGTA
ATTGTTAGAAGAATTCCTATTGGAGGTGTTAAATCTACAAGCAAGACATATGTTATAAGTCGAACTGAAC
CAGCGATGGCAACTACAAAAGCAATTGATGACTCTTCCGCGTCTATTTCTCTGGCCCAGCTTACAAAGAC
TGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGATAAAATTAAAGCAATGATGTCGCAATCTGGCCAT
GAATACGACCCAATCAATTACATGAAGAAACCTCTAGGTCCACCACCTCCATCTTACACGTGTTTCCGTT
GTGGTAAACCTGGACATTATATTAAGAATTGCCCAACAAATGGGGATAAAAACTTTGAATCTGGTCCTAG
GATTAAAAAGAGCACTGGAATTCCCAGAAGTTTCATGATGGAAGTGAAAGATCCTAATATGAAAGGTGCA
ATGCTTACCAACACTGGAAAATATGCAATACCAACTATAGATGCAGAAGCATATGCAATTGGGAAGAAAG
AGAAACCTCCCTTCTTACCAGAGGAGCCATCTTCTTCCTCAGAAGAAGATGATCCTATCCCAGATGAATT
GTTGTGTCTCATCTGCAAGGATATTATGACTGATGCTGTTGTGATTCCCTGCTGTGGAAACAGTTACTGT
GATGAATGTATAAGAACAGCACTCCTGGAATCAGATGAGCACACATGTCCGACGTGTCATCAAAATGATG
TTTCTCCTGATGCTTTAATTGCCAATAAATTTTTACGACAGGCTGTAAATAACTTCAAAAATGAAACTGG
CTATACAAAAAGACTACGAAAACAGTTACCTCCTCCACCACCCCCAATACCACCTCCGAGACCACTGATT
CAGAGGAACCTACAACCTCTGATGAGATCTCCGATATCAAGACAACAAGATCCTCTTATGATTCCAGTGA
CATCTTCATCAACTCACCCAGCTCCGTCTATATCTTCATTAACTTCTAATCAGTCTTCCTTGGCCCCTCC
TGTGTCTGGAAATCCGTCTTCTGCTCCAGCTCCTGTACCTGATATAACTGCAACAGTATCCATATCAGTT
CATTCAGAAAAATCAGATGGACCTTTTCGGGATTCTGATAATAAAATATTGCCAGCTGCAGCTCTTGCAT
CAGAGCACTCAAAGGGAACCTCCTCAATTGCAATTACCGCTCTTATGGAAGAGAAGGGTTACCAGGTGCC
TGTTCTTGGAACCCCATCTTTGCTTGGACAGTCATTATTGCATGGACAGTTGATCCCCACAACTGGTCCA
GTAAGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCAGGCTGGGAACATTCCAACAAACTTGGCTATC
TGGTTTCTCCACCACAACAAATTAGAAGAGGGGAGAGGAGCTGCTACAGAAGTATAAACCGTGGGCGACA
CCACAGCGAAAGATCACAGAGGACTCAAGGCCCGTCACTACCAGCAACTCCAGTCTTTGTACCTGTTCCA
CCACCTCCTTTGTATCCGCCTCCTCCCCATACACTTCCTCTCCCTCCGGGTGTTCCTCCTCCACAGTTTT
CTCCTCAGTTTCCTCCTGGCCAGCCACCACCCGCTGGGTATAGTGTCCCTCCTCCAGGGTTTCCTCCAGC
TCCTGCCAATTTATCAACACCTTGGGTATCATCAGGAGTGCAGACAGCTCATTCAAATACCATCCCAACA
ACACAAGCACCACCTTTGTCCAGGGAAGAATTCTATAGAGAGCAGCGACGACTAAAAGAAGAGGAAAAGA
AAAAGTCCAAGCTAGATGAGTTTACAAATGATTTTGCTAAGGAATTGATGGAATACAAAAAGATTCAAAA
GGAGCGTAGGCGCTCATTTTCCAGGTCTAAATCTCCCTATAGTGGTTCTTCGTATTCAAGAAGTTCATAT
ACTTATTCTAAATCAAGATCTGGTTCAACACGTTCACGCTCTTATTCTCGATCATTCAGCCGCTCACATT
CTCGTTCCTATTCACGGTCACCTCCATACCCCAGAAGAGGCAGAGGCAAGAGCCGCAATTACCGTTCACG
GTCTAGATCTCATGGATATCATCGATCTAGGTCAAGGTCACCCCCTTACAGACGCTATCATTCACGATCA
AGATCTCCTCAAGCGTTTAGGGGACAGTCTCCTAATAAACGTAATGTACCTCAAGGGGAAACAGAACGTG
AATATTTTAATAGATACAGAGAAGTTCCACCACCATATGACATGAAAGCATATTATGGGAGAAGTGTTGA
CTTTAGAGACCCATTTGAAAAAGAACGCTACCGAGAATGGGAGAGAAAATATAGAGAGTGGTATGAAAAA
TATTATAAAGGTTATGCTGCTGGAGCACAGCCTAGACCCTCAGCAAATAGAGAGAACTTTTCTCCAGAGA
GATTTTTGCCACTTAACATCAGGAATTCTCCCTTCACAAGAGGCCGCAGAGAAGACTATGTTGGTGGGCA
AAGTCATAGAAGTCGAAACATAGGTAGCAACTATCCAGAAAAGCTTTCAGCAAGAGATGGTCACAATCAG
AAGGATAATACAAAGTCAAAAGAGAAGGAGAGTGAAAACGCTCCAGGAGATGGTAAAGGAAATAAGCATA
AGAAACACAGAAAAAGAAGAAAAGGGGAGGAAAGTGAGGGTTTTCTGAACCCAGAGTTATTAGAGACTTC
TAGGAAATCAAGAGAACCTACAGGTGTTGAAGAAAATAAAACAGACTCATTGTTTGTTCTCCCAAGTAGA
GATGATGCCACACCTGTTAGAGATGAACCAATGGATGCAGAATCAATCACTTTTAAATCAGTGTCTGAAA
AAGACAAGAGAGAAAGGGATAAACCAAAAGCAAAGGGTGATAAAACCAAACGGAAGAATGATGGATCTGC
TGTGTCCAAAAAAGAAAATATTGTAAAACCTGCTAAAGGACCCCAAGAAAAAGTAGATGGAGAACGTGAG
AGATCTCCTCGATCTGAACCTCCAATTAAAAAAGCCAAAGAGGAGACTCCGAAGACTGACAATACTAAAT
CATCATCTTCCTCTCAGAAGGATGAAAAAATCACTGGAACCCCCAGAAAAGCTCACTCTAAATCAGCAAA
AGAACACCAAGAAACAAAACCAGTCAAAGAGGAAAAAGTGAAGAAGGACTATTCCAAAGATGTCAAATCA
GAAAAGCTAACAACTAAGGAAGAAAAGGCCAAGAAGCCTAATGAGAAAAACAAACCACTTGATAATAAGG
GAGAAAAAAGAAAAAGAAAAACTGAAGAAAAAGGCGTAGATAAAGATTTTGAGTCTTCTTCAATGAAAAT
CTCGAAACTAGAAGTGACTGAAATAGTGAAACCATCACCAAAGCGCAAAATGGAACCTGATACTGAAAAA
ATGGATAGGACCCCTGAAAAGGACAAAATTTCTTTAAGTGCGCCAGCCAAAAAAATCAAACTCAACAGAG
AAACTGGGAAGAAAATTGGAAGTACAGAAAATATATCAAACACAAAAGAACCCTCTGAAAAATTGGAGTC
AACATCTAGCAAAGTTAAACAAGAAAAAGTCAAAGGAAAGGTCAGACGAAAAGTGACTGGAACTGAAGGA
TCCAGCTCAACTCTGGTGGATTACACCAGTACGAGCTCAACTGGAGGCAGTCCTGTGCGGAAATCTGAAG
AAAAAACAGATACAAAGCGAACTGTGATTAAAACGATGGAAGAATATAATAATGACAATACCGCGCCAGC
TGAAGATGTTATCATTATGATTCAGGTTCCTCAATCCAAATGGGATAAAGATGACTTTGAATCTGAAGAA
GAAGATGTTAAATCCACACAGCCTATATCAAGTGTAGGAAAACCTGCTAGTGTTATAAAAAATGTTAGTA
CAAAGCCATCAAATATAGTCAAGTATCCTGAGAAAGAAAGTGAGCCATCCGAGAAAATTCAGAAATTCAC
CAAGGACGTGAGCCATGAAATCATACAACATGAGGTTAAAAGTTCAAAAAACTCTGCATCTAGTGAAAAA
GGGAAAACCAAAGATCGAGATTATTCAGTGTTGGAAAAGGAGAACCCTGAAAAGAGGAAGAACAGCACTC
AGCCAGAGAAAGAGAGTAATTTGGACCGTCTGAATGAACAAGGAAATTTTAAAAGTCTGTCTCAATCTTC
CAAAGAGGCTAGAACGTCAGATAAACATGATTCCACTCGTGCTTCCTCAAATAAAGACTTCACTCCCAAT
AGAGACAAAAAAACTGACTATGACACCAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAAAGAATGAAT
TAACAAGACGAAAAGACTCTCCTTCTCGGAATAAAGATTCTGCATCTGGACAGAAAAATAAACCAAGGGA
AGAGAGAGATTTGCCTAAAAAAGGAACAGGAGATTCCAAAAAAAGTAATTCTAGTCCCTCAAGAGACAGA
AAACCTCATGATCACAAAGCCACTTATGATACTAAACGGCCAAATGAAGAGACAAAATCTGTAGATAAAA
ATCCTTGTAAGGATCGTGAGAAGCATGTATTAGAAGCAAGGAACAATAAAGAGTCAAGTGGCAATAAACT
ACTTTATATACTTAACCCACCAGAGACACAGGTTGAAAAAGAGCAAATTACTGGGCAAATTGACAAGAGT
ACTGTCAAGCCTAAACCCCAGTTAAGTCATTCCTCTAGACTTTCCTCTGACTTAACTAGAGAAACTGATG
AAGCTGCTTTTGAACCAGACTATAATGAAAGTGACAGTGAAAGTAATGTTTCTGTAAAAGAAGAGGAATC
TTCAGGAAACATTTCTAAGGACCTGAAAGATAAAATAGTGGAGAAAGCAAAAGAGAGCCTGGACACAGCA
GCAGTTGTCCAGGTGGGCATAAGCAGGAATCAGAGCCACAGCAGCCCCAGCGTCAGCCCCAGCAGAAGCC
ACAGTCCTTCTGGAAGCCAGACCCGAAGCCACAGTAGCAGTGCCAGCTCAGCAGAAAGTCAGGACAGCAA
GAAGAAGAAGAAAAAGAAGGAAAAGAAAAAACACAAGAAACATAAAAAGCATAAGAAGCATAAGAAACAT
GCAGGCACTGAAGTGGAATTGGAAAAAAGCCAAAAACACAAACACAAGAAAAAGAAGTCAAAGAAGAACA
AAGATAAAGAGAAGGAGAAGGAGAAAGATGACCAAAAAGTGAAATCTGTCACTGTGTAA

Translation (1792 aa):
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDDNALIPKNSSV
IVRRIPIGGVKSTSKTYVISRTEPAMATTKAIDDSSASISLAQLTKTANLAEANASEEDKIKAMMSQSGH
EYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDKNFESGPRIKKSTGIPRSFMMEVKDPNMKGA
MLTNTGKYAIPTIDAEAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYC
DECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLI
QRNLQPLMRSPISRQQDPLMIPVTSSSTHPAPSISSLTSNQSSLAPPVSGNPSSAPAPVPDITATVSISV
HSEKSDGPFRDSDNKILPAAALASEHSKGTSSIAITALMEEKGYQVPVLGTPSLLGQSLLHGQLIPTTGP
VRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSERSQRTQGPSLPATPVFVPVP
PPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFPPAPANLSTPWVSSGVQTAHSNTIPT
TQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSY
TYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRS
RSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEK
YYKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREDYVGGQSHRSRNIGSNYPEKLSARDGHNQ
KDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSREPTGVEENKTDSLFVLPSR
DDATPVRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERE
RSPRSEPPIKKAKEETPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKS
EKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDTEK
MDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQEKVKGKVRRKVTGTEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEE
EDVKSTQPISSVGKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKNSASSEK
GKTKDRDYSVLEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPN
RDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPSRDR
KPHDHKATYDTKRPNEETKSVDKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKS
TVKPKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEESSGNISKDLKDKIVEKAKESLDTA
AVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKH
AGTEVELEKSQKHKHKKKKSKKNKDKEKEKEKDDQKVKSVTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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