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Report for CCDS10687.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10687.1 Public Homo sapiens 16 PRR14 24 110 108 CCDS HistoryNCBI Gene:78994Re-query CCDS DB by CCDS ID:10687.1Re-query CCDS DB by GeneID:78994See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10687.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300835.9 ENSP00000300835.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300835.9Link to Ensembl Protein Viewer:ENSP00000300835.4Re-query CCDS DB by Nucleotide ID:ENST00000300835Re-query CCDS DB by Protein ID:ENSP00000300835
Original member Current member EBI ENST00000542965.2 ENSP00000441641.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542965.2Link to Ensembl Protein Viewer:ENSP00000441641.2Re-query CCDS DB by Nucleotide ID:ENST00000542965Re-query CCDS DB by Protein ID:ENSP00000441641
Original member Current member NCBI NM_001320464.3 NP_001307393.1 Accepted alive Link to Nucleotide Sequence:NM_001320464.3Link to Protein Sequence:NP_001307393.1Re-query CCDS DB by Nucleotide ID:NM_001320464Re-query CCDS DB by Protein ID:NP_001307393Link to BLAST:NP_001307393.1
Original member Current member NCBI NM_024031.5 NP_076936.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024031.5Link to Protein Sequence:NP_076936.1Re-query CCDS DB by Nucleotide ID:NM_024031Re-query CCDS DB by Protein ID:NP_076936Link to BLAST:NP_076936.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307393.1 585 Q9BWN1 585 100% 0 0
NP_076936.1 585 Q9BWN1 585 100% 0 0

Chromosomal Locations for CCDS 10687.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30651646 30651668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30651796 30651964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30652721 30652842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30652914 30653103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30653365 30653408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30654230 30654339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30654629 30655214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30655351 30655420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30655502 30655593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30655868 30655939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30656032 30656311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1758 nt):
ATGGACTTGCCCGGGGACTCCAGCCCGCCTGGCCAGCCGCGTCTGTGCCGCCAGCCTCTGACTCGAGCAT
TATGGGGAGCCAGGAGCCCGAAACGGCCGAGGCTGCAGCTCCCGGGGGCCCCTTCTCCCCTGGAAAAGGC
CTCTCGGCGGGTCCTGGCCGTGGTGCTAGAAGATGTCATGGCTGTTCACATGGTCCCCGTGGTGCCCTCA
AAGCAGACCTCCATACCACAGCACCACAGCTACCATCAGGATCCTGTCCACAGGCAGCCGCCTGCCTCGC
CACCCCGGCAGGCCGGGTGGTCCTCGCAGGCCAGGCCTCCCGACCCTCTGTGTTTGTGTCGCGAGCCCTT
GAGCCGCATCCACCGGACCTCTTCCACCCTGAGGCGGCGATCAAGGACAACCCCTGGCCCAGAGGAGGGC
CCTTCACAAAAGGTGGACCGGGCCCCCCAGCCCACCCTGGTGGTGATGCTGGAAGACATCGCCAGTCCTA
GACCCCCCGCTGAGGGCTTCATTGATGAGACCCCCAACTTCATCATCCCAGCACAAAGAGCTGAGCCCAT
GAGGATAGTTCGCCAGCCAACGCCTCCACCTGGGGACCTAGAACCCCCATTCCAGCCATCTGCTCTGCCT
GCAGACCCTCTGGAGAGCCCACCAACAGCCCCAGATCCTGCTCTGGAGCTCCCATCCACCCCACCACCGT
CCAGCCTTTTACGCCCCCGCCTCAGTCCCTGGGGCTTGGCCCCGCTCTTCCGTTCCGTCCGCTCCAAGCT
GGAGAGCTTTGCTGACATCTTCCTCACGCCCAACAAAACCCCACAGCCCCCACCCCCGTCCCCCCCAATG
AAGCTGGAGTTGAAGATCGCCATCTCAGAGGCCGAGCAGTCTGGGGCTGCTGAGGGCACTGCGTCTGTCA
GCCCCCGGCCCCCAATCCGCCAGTGGCGAACTCAGGACCACAATACCCCAGCACTTCTCCCTAAGCCCTC
TCTGGGCCGAAGCTACTCCTGCCCTGATCTGGGGCCCCCTGGCCCAGGTACCTGCACCTGGCCACCTGCT
CCACCCCAACCAAGCCGACCACGGCCGCGGCGGCACACTGTGGGTGGTGGGGAAATGGCCCGAGCCCCGC
CACCCCCTCGGCCCTGTCTCCGGAAAGAGGTCTTCCCTCTCGGAGGAGTGGGAGCCTCCCCTTCTCTCAC
CACATCTTGCTCGTCCACGGCATCCACTTCCTTCTCCGAACCAGCAGAACCCAGGTTGGGTTCAACCAAA
GGGAAGGAGCCAAGAGCCTCAAAGGACCAGGTGCTTTCAGAACCTGAGACCAAGACCATGGGAAAGGTTT
CTCGATTCAGAATACGCAGAACACCAGCCCGTCCTCAGCTAAACCTTACACCAATGGGACTGCCTCGACC
AATCAGGTTGAACAAGAAGGAGTTCAGCTTGGAAGAAATTTACACCAACAAGAATTACCAATCACCCACA
ACCAGGAGGACCTTTGAGACCATCTTTGAGGAACCCCGGGAGCGCAATGGGACTCTGATTTTCACCAGCT
CAAGGAAGCTCCGGCGGGCTGTGGAATTTCGGGACAGCAGCCTTCCTCGATCACGAAGACCGTCCCGTGG
GGTCCGGGCTGCAGGGGGCAGGACTGTTCCTCCCAATGTGGCCCCCAGCCCTGATGTGGGCCCCCTGCTC
CAGCAGCGGCTGGAGGAGCTAGATGCCTTGCTCCTGGAGGAAGAAACAGTAGATCGGGAGCAGCCCCACT
GGACCTAG

Translation (585 aa):
MDLPGDSSPPGQPRLCRQPLTRALWGARSPKRPRLQLPGAPSPLEKASRRVLAVVLEDVMAVHMVPVVPS
KQTSIPQHHSYHQDPVHRQPPASPPRQAGWSSQARPPDPLCLCREPLSRIHRTSSTLRRRSRTTPGPEEG
PSQKVDRAPQPTLVVMLEDIASPRPPAEGFIDETPNFIIPAQRAEPMRIVRQPTPPPGDLEPPFQPSALP
ADPLESPPTAPDPALELPSTPPPSSLLRPRLSPWGLAPLFRSVRSKLESFADIFLTPNKTPQPPPPSPPM
KLELKIAISEAEQSGAAEGTASVSPRPPIRQWRTQDHNTPALLPKPSLGRSYSCPDLGPPGPGTCTWPPA
PPQPSRPRPRRHTVGGGEMARAPPPPRPCLRKEVFPLGGVGASPSLTTSCSSTASTSFSEPAEPRLGSTK
GKEPRASKDQVLSEPETKTMGKVSRFRIRRTPARPQLNLTPMGLPRPIRLNKKEFSLEEIYTNKNYQSPT
TRRTFETIFEEPRERNGTLIFTSSRKLRRAVEFRDSSLPRSRRPSRGVRAAGGRTVPPNVAPSPDVGPLL
QQRLEELDALLLEEETVDREQPHWT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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