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Report for CCDS10764.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10764.2 Public Homo sapiens 16 MT1E 24 110 108 CCDS HistoryNCBI Gene:4493Re-query CCDS DB by CCDS ID:10764.2Re-query CCDS DB by GeneID:4493See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10764.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306061.10 ENSP00000307706.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000306061.10Link to Ensembl Protein Viewer:ENSP00000307706.5Re-query CCDS DB by Nucleotide ID:ENST00000306061Re-query CCDS DB by Protein ID:ENSP00000307706
Original member Current member NCBI NM_175617.4 NP_783316.2 Accepted alive Link to Nucleotide Sequence:NM_175617.4Link to Protein Sequence:NP_783316.2Re-query CCDS DB by Nucleotide ID:NM_175617Re-query CCDS DB by Protein ID:NP_783316Link to BLAST:NP_783316.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783316.2 61 P04732-1 61 100% 0 0

Chromosomal Locations for CCDS 10764.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 56625852 56625879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56626466 56626531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56626880 56626971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (186 nt):
ATGGACCCCAACTGCTCTTGCGCCACTGGTGGCTCCTGCACGTGCGCCGGCTCCTGCAAGTGCAAAGAGT
GCAAATGCACCTCCTGCAAGAAGAGCTGCTGTTCCTGCTGCCCCGTGGGCTGTGCCAAGTGTGCCCAGGG
CTGCGTCTGCAAAGGGGCATCGGAGAAGTGCAGCTGCTGTGCCTGA

Translation (61 aa):
MDPNCSCATGGSCTCAGSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCVCKGASEKCSCCA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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