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Report for CCDS10769.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10769.1 Public Homo sapiens 16 NUP93 24 110 108 CCDS HistoryNCBI Gene:9688Re-query CCDS DB by CCDS ID:10769.1Re-query CCDS DB by GeneID:9688See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10769.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308159.10 ENSP00000310668.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308159.10Link to Ensembl Protein Viewer:ENSP00000310668.5Re-query CCDS DB by Nucleotide ID:ENST00000308159Re-query CCDS DB by Protein ID:ENSP00000310668
Original member Current member NCBI NM_014669.5 NP_055484.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014669.5Link to Protein Sequence:NP_055484.3Re-query CCDS DB by Nucleotide ID:NM_014669Re-query CCDS DB by Protein ID:NP_055484Link to BLAST:NP_055484.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055484.3 819 Q8N1F7-1 819 100% 0 0

Chromosomal Locations for CCDS 10769.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 56748248 56748426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56758538 56758655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56798476 56798538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56805504 56805632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56818664 56818738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56821504 56821593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56823707 56823846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56828977 56829109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56830528 56830685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56831842 56832007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56832295 56832388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56833215 56833406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56834128 56834254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56834370 56834442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56834734 56834778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56836601 56836717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56837608 56837726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56838952 56839069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56839521 56839604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56841705 56841833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56844499 56844609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2460 nt):
ATGGATACTGAGGGGTTTGGTGAGCTCCTTCAGCAAGCTGAACAGCTTGCTGCTGAGACTGAGGGCATCT
CAGAGCTTCCCCATGTGGAACGGAACTTACAGGAGATCCAGCAGGCGGGAGAGCGCCTGCGTTCCCGTAC
CCTAACACGCACGTCCCAGGAGACGGCAGATGTCAAGGCGTCAGTTCTCCTCGGGTCTCGGGGACTTGAC
ATATCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGAGCCTCTTGAGCCTGTGA
AGGACACTGACATTCAGGGCTTCCTGAAGAATGAGAAGGACAATGCCCTGCTGTCTGCCATCGAAGAGTC
CCGGAAGAGGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTG
AAACAGCGAATTCTGCACACACTGCTGGCATCAGGAGAAGACGCCCTTGACTTTACTCAAGAAAGCGAGC
CAAGCTACATCAGTGATGTGGGACCCCCTGGTCGAAGCTCTCTGGATAACATCGAGATGGCCTATGCGCG
GCAAATTTATATCTATAATGAGAAAATTGTAAATGGACACCTGCAGCCTAACCTGGTGGACCTTTGTGCT
TCCGTCGCAGAGCTCGATGATAAGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGT
TGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCA
GGCCTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAG
GCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTC
CCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTACTGCATGCG
CTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACC
TGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGC
ATTACCGTAGGGCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATG
TGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAA
GTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGT
TGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTT
CCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTC
CATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCA
GCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCG
GAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGT
CAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTC
TTGGGAAACTAGAGAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCC
TATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGAC
CTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCA
GTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCA
AGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGAC
GAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATC
AGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAACCTCTCAGA
AGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCG
TCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTA
CCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCT
CATGAATTAA

Translation (819 aa):
MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLD
ISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQV
KQRILHTLLASGEDALDFTQESEPSYISDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCA
SVAELDDKSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQ
AQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKT
WFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQ
VCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAV
HVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDS
QGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYD
LAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFD
EYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSS
SSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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