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Report for CCDS10818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10818.1 Public Homo sapiens 16 DYNC1LI2 24 110 108 CCDS HistoryNCBI Gene:1783Re-query CCDS DB by CCDS ID:10818.1Re-query CCDS DB by GeneID:1783See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10818.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258198.7 ENSP00000258198.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258198.7Link to Ensembl Protein Viewer:ENSP00000258198.2Re-query CCDS DB by Nucleotide ID:ENST00000258198Re-query CCDS DB by Protein ID:ENSP00000258198
Original member Current member NCBI NM_006141.3 NP_006132.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006141.3Link to Protein Sequence:NP_006132.1Re-query CCDS DB by Nucleotide ID:NM_006141Re-query CCDS DB by Protein ID:NP_006132Link to BLAST:NP_006132.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006132.1 492 O43237-1 492 100% 0 0

Chromosomal Locations for CCDS 10818.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 66723722 66723822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66725828 66725944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66727688 66727805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66728201 66728242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66729040 66729099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66730112 66730223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66732339 66732474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66734218 66734311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66736075 66736244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66742438 66742668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66749197 66749313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66751273 66751346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66751485 66751591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGGCGCCGGTGGGGGTGGAGAAGAAGCTGCTGCTAGGTCCCAACGGGCCCGCGGTGGCGGCCGCCGGCG
ACCTGACCAGTGAGGAGGAGGAAGGCCAGAGCCTATGGTCCTCCATTCTGAGCGAAGTGTCCACCCGCGC
CAGGTCCAAGCTGCCGTCCGGCAAGAACATCCTGGTCTTCGGTGAAGATGGTTCTGGTAAAACAACCCTC
ATGACTAAACTACAAGGAGCTGAGCATGGCAAAAAAGGAAGAGGCCTAGAATATCTCTACCTCAGTGTCC
ATGATGAGGACCGAGATGATCACACGCGCTGCAACGTGTGGATTCTGGATGGAGACTTGTACCACAAAGG
CCTGCTGAAATTTGCAGTTTCTGCTGAATCCTTGCCAGAGACCCTCGTCATTTTTGTTGCAGACATGTCT
AGACCTTGGACTGTGATGGAATCTCTGCAGAAATGGGCTAGTGTTTTACGTGAGCACATTGATAAAATGA
AAATTCCACCAGAAAAAATGAGGGAGCTGGAACGGAAGTTTGTGAAAGATTTTCAAGACTATATGGAACC
TGAAGAAGGTTGTCAAGGTTCCCCACAGAGAAGAGGCCCTCTGACCTCAGGCTCCGATGAAGAAAATGTT
GCCCTGCCTCTGGGTGACAATGTGCTGACTCATAACCTGGGGATCCCGGTGTTGGTGGTGTGCACAAAGT
GTGATGCGGTGAGTGTCCTGGAGAAGGAGCACGATTACAGGGATGAGCATTTGGACTTTATCCAGTCACA
CCTGCGGAGGTTCTGCCTTCAGTATGGAGCTGCCTTGATTTACACATCAGTGAAAGAAGAGAAAAACCTC
GACTTGTTGTATAAGTATATTGTTCATAAAACATACGGTTTCCACTTCACCACACCTGCCTTAGTTGTGG
AAAAGGATGCCGTTTTTATACCTGCAGGCTGGGACAATGAAAAGAAAATAGCTATTTTACATGAAAATTT
TACAACCGTGAAGCCGGAAGATGCATATGAAGACTTTATTGTGAAACCTCCCGTGAGAAAGCTGGTCCAC
GACAAAGAGTTGGCAGCAGAAGATGAGCAGGTGTTCCTAATGAAGCAACAGTCACTCCTTGCCAAGCAAC
CAGCCACTCCCACGAGAGCTTCTGAATCTCCTGCAAGAGGACCCTCTGGCTCTCCAAGGACCCAGGGTCG
GGGAGGGCCAGCCAGTGTGCCTAGCTCCTCCCCAGGCACGTCAGTAAAAAAGCCGGACCCAAACATCAAA
AATAATGCAGCAAGTGAAGGGGTGTTGGCCAGCTTCTTCAACAGTCTGTTGAGTAAAAAGACAGGCTCTC
CTGGAAGTCCTGGTGCTGGTGGGGTGCAGAGCACAGCCAAGAAGTCAGGACAAAAGACTGTGTTGTCAAA
TGTTCAGGAAGAACTGGATAGAATGACTCGAAAGCCAGACTCTATGGTAACAAACTCTTCAACAGAAAAT
GAAGCCTGA

Translation (492 aa):
MAPVGVEKKLLLGPNGPAVAAAGDLTSEEEEGQSLWSSILSEVSTRARSKLPSGKNILVFGEDGSGKTTL
MTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS
RPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENV
ALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNL
DLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVH
DKELAAEDEQVFLMKQQSLLAKQPATPTRASESPARGPSGSPRTQGRGGPASVPSSSPGTSVKKPDPNIK
NNAASEGVLASFFNSLLSKKTGSPGSPGAGGVQSTAKKSGQKTVLSNVQEELDRMTRKPDSMVTNSSTEN
EA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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