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Report for CCDS10846.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10846.2 Public Homo sapiens 16 TSNAXIP1 24 110 108 CCDS HistoryNCBI Gene:55815Re-query CCDS DB by CCDS ID:10846.2Re-query CCDS DB by GeneID:55815See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10846.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388833.7 ENSP00000373485.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000388833.7Link to Ensembl Protein Viewer:ENSP00000373485.3Re-query CCDS DB by Nucleotide ID:ENST00000388833Re-query CCDS DB by Protein ID:ENSP00000373485
Original member Current member NCBI NM_018430.4 NP_060900.2 Accepted alive Link to Nucleotide Sequence:NM_018430.4Link to Protein Sequence:NP_060900.2Re-query CCDS DB by Nucleotide ID:NM_018430Re-query CCDS DB by Protein ID:NP_060900Link to BLAST:NP_060900.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060900.2 658 Q2TAA8-1 658 100% 0 0

Chromosomal Locations for CCDS 10846.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67820854 67820951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67821099 67821225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67823626 67823719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67824583 67824779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825137 67825272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825667 67825836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825917 67826076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826152 67826282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826437 67826562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826692 67826844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826963 67827072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827249 67827375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827473 67827579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827753 67827993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1977 nt):
ATGGGTGGGCACCTGTCCCCATGGCCCACATACACCAGTGGCCAGACCATTTTGCAAAATCGAAAACCCT
GTTCAGATGACTACCGGAAGCGAGTAGGGAGCTGCCAGCAGCACCCCTTTCGCACTGCCAAGCCCCAGTA
CTTGGAGGAACTGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAG
GAACTAAGGCTGCAGCCTTACAGAGAGATCTTTGAGTTCTTCATAGAGGACTTCAAAACGTACAAGCCAT
TACTATCCTCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGGA
GCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAG
GAGAAATATGAAATCTCCCTGCTCAAGAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATG
AGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAAGAACTTGGCTGAGGAGTACCTGCACTA
CCTCAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGAC
ATGTCATTAGCCCAGTCGCCAGGCATCTGGGGGGAGGACCCTGTGAAGTTAACCCTGGCTCTTAAGATGA
CCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGGCCAACTTTGGAGATGTGGTCCC
CAGGAGGGACTTTGAAATGCAGGAGAAGACCAACAAGGATCTTCAGGAGCAGCTGGACACCCTGAGAGCC
AGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGG
ACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAA
AGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACAGCGACCAGCTGGTG
GACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGTCTGGGCTATG
GGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAAGGACGT
GGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAGCAGAAAGAGACGTTCCCAGATTTC
TTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCTGGGCTTATACTATTTTTGAAA
ATATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATGCAGTCTTGATGGGAAAGCGGAGTGA
GAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAATGCTGACAGTCAG
AACGAGGGGCTACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAG
AGCAAATCCAGGAGCTGATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCAACTA
CCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATAC
ATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGA
CTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTA
CATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCAGAGGAGGGTGACGAGAAGGAAGAAGCCGTG
GTGGAAATCCTCCAGACTGCCCTGGAGCGGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGC
CAGAGCCTGCAAGCTAG

Translation (658 aa):
MGGHLSPWPTYTSGQTILQNRKPCSDDYRKRVGSCQQHPFRTAKPQYLEELENYLRKELLLLDLGTDSTQ
ELRLQPYREIFEFFIEDFKTYKPLLSSIKNAYEGMLAHQREKIRALEPLKAKLVTVNEDCNERILAMRAE
EKYEISLLKKEKMNLLKLIDKKNEEKISLQSEVTKLRKNLAEEYLHYLSERDACKILIADLNELRYQRED
MSLAQSPGIWGEDPVKLTLALKMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEKTNKDLQEQLDTLRA
SYEEVRKEHEILMQLHMSTLKERDQFFSELQEIQRTSTPRPDWTKCKDVVAGGPERWQMLAEGKNSDQLV
DVLLEEIGSGLLREKDFFPGLGYGEAIPAFLRFDGLVENKKPSKKDVVNLLKDAWKERLAEEQKETFPDF
FFNFLEHRFGPSDAMAWAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETVAQLLKEMTNADSQ
NEGLLTMEQFNTVLKSTFPLKTEEQIQELMEAGGWHPSSSNADLLNYRSLFMEDEEGQSEPFVQKLWEQY
MDEKDEYLQQLKQELGIELHEEVTLPKLRGGLMTIDPSLDKQTVNTYMSQAFQLPESEMPEEGDEKEEAV
VEILQTALERLQVIDIRRVGPREPEPAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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