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Report for CCDS10875.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10875.1 Public Homo sapiens 16 PDF 24 110 108 CCDS HistoryNCBI Gene:64146Re-query CCDS DB by CCDS ID:10875.1Re-query CCDS DB by GeneID:64146See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10875.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288022.2 ENSP00000288022.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000288022.2Link to Ensembl Protein Viewer:ENSP00000288022.1Re-query CCDS DB by Nucleotide ID:ENST00000288022Re-query CCDS DB by Protein ID:ENSP00000288022
Original member Current member NCBI NM_022341.2 NP_071736.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022341.2Link to Protein Sequence:NP_071736.1Re-query CCDS DB by Nucleotide ID:NM_022341Re-query CCDS DB by Protein ID:NP_071736Link to BLAST:NP_071736.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071736.1 243 Q9HBH1 243 100% 0 0

Chromosomal Locations for CCDS 10875.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 69329022 69329179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69329997 69330570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (732 nt):
ATGGCCCGGCTGTGGGGCGCGCTGAGTCTTTGGCCACTGTGGGCGGCCGTGCCGTGGGGCGGGGCGGCAG
CCGTCGGTGTCCGGGCTTGCAGCTCCACGGCCGCCCCGGACGGCGTCGAGGGCCCGGCGCTGCGGCGCTC
CTATTGGCGCCACCTGAGGCGTCTGGTGCTGGGTCCTCCCGAACCGCCGTTCTCGCACGTGTGCCAAGTC
GGGGACCCGGTGCTGCGCGGCGTGGCGGCCCCGGTGGAGCGGGCGCAGCTAGGCGGGCCCGAGCTGCAGC
GGCTGACGCAACGGCTGGTCCAGGTGATGCGGCGGCGGCGCTGCGTGGGCCTAAGCGCGCCGCAGCTGGG
GGTGCCGCGGCAGGTGCTGGCGCTGGAGCTCCCCGAGGCGCTGTGTCGGGAGTGCCCGCCCCGCCAGCGC
GCGCTCCGCCAAATGGAGCCCTTCCCCCTGCGCGTGTTCGTGAACCCCAGCCTGCGAGTGCTTGACAGCC
GCCTGGTCACCTTTCCCGAGGGCTGCGAGAGCGTCGCCGGCTTCCTGGCCTGCGTGCCCCGCTTCCAGGC
GGTGCAGATCTCAGGGCTGGACCCCAATGGAGAACAGGTGGTGTGGCAGGCGAGCGGGTGGGCAGCCCGC
ATCATCCAGCACGAGATGGACCACCTGCAGGGCTGCCTGTTTATTGACAAAATGGACAGCAGGACGTTCA
CAAACGTCTATTGGATGAAGGTGAATGACTAA

Translation (243 aa):
MARLWGALSLWPLWAAVPWGGAAAVGVRACSSTAAPDGVEGPALRRSYWRHLRRLVLGPPEPPFSHVCQV
GDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQVLALELPEALCRECPPRQR
ALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAVQISGLDPNGEQVVWQASGWAAR
IIQHEMDHLQGCLFIDKMDSRTFTNVYWMKVND


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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