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Report for CCDS10914.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10914.2 Public Homo sapiens 16 ZFP1 24 110 108 CCDS HistoryNCBI Gene:162239Re-query CCDS DB by CCDS ID:10914.2Re-query CCDS DB by GeneID:162239See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10914.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393430.6 ENSP00000377080.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393430.6Link to Ensembl Protein Viewer:ENSP00000377080.2Re-query CCDS DB by Nucleotide ID:ENST00000393430Re-query CCDS DB by Protein ID:ENSP00000377080
Original member Current member EBI ENST00000570010.6 ENSP00000457044.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000570010.6Link to Ensembl Protein Viewer:ENSP00000457044.1Re-query CCDS DB by Nucleotide ID:ENST00000570010Re-query CCDS DB by Protein ID:ENSP00000457044
Original member Current member NCBI NM_001318469.2 NP_001305398.1 Accepted alive Link to Nucleotide Sequence:NM_001318469.2Link to Protein Sequence:NP_001305398.1Re-query CCDS DB by Nucleotide ID:NM_001318469Re-query CCDS DB by Protein ID:NP_001305398Link to BLAST:NP_001305398.1
Original member Current member NCBI NM_153688.4 NP_710155.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153688.4Link to Protein Sequence:NP_710155.2Re-query CCDS DB by Nucleotide ID:NM_153688Re-query CCDS DB by Protein ID:NP_710155Link to BLAST:NP_710155.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305398.1 407 Q6P2D0-1 407 100% 0 0
NP_710155.2 407 Q6P2D0-1 407 100% 0 0

Chromosomal Locations for CCDS 10914.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 75152952 75152966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75166770 75166896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75169253 75170334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGAACAAATCCCAGGGATCAGTTTCATTCACGGATGTGACTGTGGACTTTACCCAGGAGGAATGGGAAC
AACTGGACCCCTCTCAGAGGATCCTATACATGGATGTGATGCTGGAGAATTATAGCAACTTACTTTCAGT
GGAAGTGTGGAAGGCTGATGACCAGATGGAGAGAGACCACAGAAACCCAGACGAGCAGGCGAGGCAATTT
TTAATTCTTAAGAACCAAACCCCAATTGAGGAAAGAGGCGATCTCTTTGGAAAAGCACTTAATCTGAACA
CAGACTTTGTTTCTTTAAGACAAGTACCTTATAAATATGACTTATATGAAAAAACTTTGAAATATAATTC
AGACTTGCTTAATAGTAATAGAAGCTATGCAGGAAAGCAGACTGATGAGTGTAATGAATTTGGAAAAGCA
CTTCTCTACCTGAAGCAAGAGAAAACCCACAGTGGAGTAGAATATTCTGAATACAATAAAAGTGGAAAAG
CCCTCAGCCATAAAGCAGCCATTTTTAAACATCAGAAAATAAAAAACTTGGTTCAACCTTTCATTTGTAC
TTACTGTGACAAGGCTTTCTCCTTTAAGTCACTCCTCATTAGTCATAAGAGAATACATACTGGAGAAAAG
CCATATGAATGCAATGTATGTAAGAAAACCTTCTCCCATAAGGCCAACCTCATCAAACATCAGAGAATTC
ACACTGGGGAGAAACCTTTCGAGTGTCCGGAATGTGGAAAAGCTTTCACCCACCAGTCAAACCTCATTGT
ACACCAGAGAGCACATATGGAGAAGAAGCCCTATGAGTGCAGTGAATGTGGAAAGACATTTGCCCAAAAG
TTTGAACTCACCACACACCAGAGAATTCATACAGGAGAGCGACCCTATGAGTGTAACGAATGTGCAAAAA
CCTTCTTTAAGAAGTCAAACCTTATCATACATCAGAAGATTCACACGGGGGAGAAACGCTATGAGTGCAG
TGAATGTGGAAAATCCTTTATCCAGAACTCACAGCTCATCATACACATGAGAACTCATACAGGAGAGAAA
CCCTATGAATGTACTGAGTGCGGCAAAACTTTCAGCCAGAGGTCAACTCTTAGATTACACTTGCGAATCC
ACACAGGAGAGAAACCATATGAGTGTTCCGAATGTGGGAAGGCCTTTAGCAGGAAGTCCCGACTCAGTGT
CCATCAGAGAGTTCACATCGGGGAGAAACCCTGA

Translation (407 aa):
MNKSQGSVSFTDVTVDFTQEEWEQLDPSQRILYMDVMLENYSNLLSVEVWKADDQMERDHRNPDEQARQF
LILKNQTPIEERGDLFGKALNLNTDFVSLRQVPYKYDLYEKTLKYNSDLLNSNRSYAGKQTDECNEFGKA
LLYLKQEKTHSGVEYSEYNKSGKALSHKAAIFKHQKIKNLVQPFICTYCDKAFSFKSLLISHKRIHTGEK
PYECNVCKKTFSHKANLIKHQRIHTGEKPFECPECGKAFTHQSNLIVHQRAHMEKKPYECSECGKTFAQK
FELTTHQRIHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRYECSECGKSFIQNSQLIIHMRTHTGEK
PYECTECGKTFSQRSTLRLHLRIHTGEKPYECSECGKAFSRKSRLSVHQRVHIGEKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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