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Report for CCDS10922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10922.1 Public Homo sapiens 16 ADAT1 24 110 108 CCDS HistoryNCBI Gene:23536Re-query CCDS DB by CCDS ID:10922.1Re-query CCDS DB by GeneID:23536See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10922.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307921.7 ENSP00000310015.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000307921.7Link to Ensembl Protein Viewer:ENSP00000310015.3Re-query CCDS DB by Nucleotide ID:ENST00000307921Re-query CCDS DB by Protein ID:ENSP00000310015
Original member Current member EBI ENST00000564657.2 ENSP00000457501.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000564657.2Link to Ensembl Protein Viewer:ENSP00000457501.2Re-query CCDS DB by Nucleotide ID:ENST00000564657Re-query CCDS DB by Protein ID:ENSP00000457501
Original member Current member NCBI NM_001324445.2 NP_001311374.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001324445.2Link to Protein Sequence:NP_001311374.1Re-query CCDS DB by Nucleotide ID:NM_001324445Re-query CCDS DB by Protein ID:NP_001311374Link to BLAST:NP_001311374.1
Original member Current member NCBI NM_012091.5 NP_036223.2 Accepted alive Link to Nucleotide Sequence:NM_012091.5Link to Protein Sequence:NP_036223.2Re-query CCDS DB by Nucleotide ID:NM_012091Re-query CCDS DB by Protein ID:NP_036223Link to BLAST:NP_036223.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001311374.1 502 Q9BUB4-1 502 100% 0 0
NP_036223.2 502 Q9BUB4-1 502 100% 0 0

Chromosomal Locations for CCDS 10922.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 75600216 75600348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75603085 75603171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75608224 75608323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75608843 75608988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75612243 75612861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75617142 75617272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75618586 75618640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75620266 75620334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75620631 75620799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1509 nt):
ATGTGGACCGCGGATGAGATTGCTCAGCTATGCTATGAACACTATGGGATCAGGCTGCCCAAGAAGGGGA
AGCCTGAGCCAAACCATGAGTGGACATTATTGGCAGCGGTGGTGAAGATACAATCTCCAGCTGACAAGGC
CTGCGACACCCCTGATAAGCCGGTGCAAGTGACAAAGGAAGTTGTGTCAATGGGAACAGGAACAAAATGC
ATAGGACAGTCCAAAATGAGGAAGAACGGAGACATCCTCAATGATAGCCATGCTGAGGTCATAGCCAGAA
GGAGTTTCCAAAGGTACCTTCTCCACCAACTCCAGTTGGCAGCCACCCTGAAAGAGGATAGCATCTTTGT
CCCAGGAACTCAAAAAGGAGTGTGGAAACTTAGACGAGACCTCATTTTTGTGTTTTTCTCCAGCCATACA
CCCTGTGGGGATGCCTCCATCATTCCGATGCTTGAGTTTGAAGATCAGCCTTGCTGTCCTGTCTTCAGAA
ATTGGGCCCACAACTCATCAGTAGAAGCCAGTAGTAACCTGGAAGCTCCTGGAAATGAAAGAAAATGTGA
AGACCCTGACAGTCCTGTAACCAAAAAGATGAGGCTTGAGCCTGGGACTGCAGCCAGGGAGGTCACCAAC
GGAGCAGCTCACCATCAGAGTTTTGGCAAGCAGAAAAGTGGCCCAATCTCACCAGGCATCCACAGCTGTG
ATCTCACTGTAGAGGGACTGGCTACTGTCACCAGAATAGCCCCTGGTAGTGCCAAAGTGATAGACGTTTA
TAGAACTGGAGCCAAGTGTGTACCTGGAGAAGCTGGAGACTCCGGAAAGCCGGGTGCTGCGTTTCACCAG
GTGGGGCTGCTCCGAGTGAAGCCAGGCCGTGGAGACAGAACACGCTCCATGTCCTGTAGTGACAAGATGG
CCCGATGGAACGTCCTCGGATGCCAAGGGGCACTGTTGATGCACTTGCTGGAAGAGCCCATCTACCTGTC
AGCTGTGGTCATTGGGAAGTGCCCATACAGCCAGGAAGCCATGCAGAGAGCACTGATTGGAAGGTGTCAG
AATGTGTCTGCTTTACCAAAAGGCTTCGGAGTTCAAGAATTAAAAATACTGCAGTCAGATTTACTATTTG
AACAGAGCCGCAGTGCGGTGCAGGCAAAAAGGGCTGATAGCCCAGGTCGACTTGTTCCTTGTGGGGCAGC
CATCAGCTGGAGTGCAGTTCCTGAGCAGCCTTTGGATGTTACTGCCAATGGCTTTCCACAGGGAACAACA
AAGAAAACAATTGGAAGCCTTCAGGCAAGATCCCAAATCAGCAAAGTGGAACTCTTCAGATCATTCCAGA
AGCTGCTAAGCAGAATTGCAAGGGACAAGTGGCCACACTCCCTCAGGGTGCAGAAGCTGGATACCTACCA
GGAGTACAAGGAGGCTGCGTCCTCTTACCAGGAAGCCTGGAGCACACTCCGGAAGCAGGTGTTTGGATCC
TGGATCAGAAACCCACCGGATTATCACCAGTTCAAGTGA

Translation (502 aa):
MWTADEIAQLCYEHYGIRLPKKGKPEPNHEWTLLAAVVKIQSPADKACDTPDKPVQVTKEVVSMGTGTKC
IGQSKMRKNGDILNDSHAEVIARRSFQRYLLHQLQLAATLKEDSIFVPGTQKGVWKLRRDLIFVFFSSHT
PCGDASIIPMLEFEDQPCCPVFRNWAHNSSVEASSNLEAPGNERKCEDPDSPVTKKMRLEPGTAAREVTN
GAAHHQSFGKQKSGPISPGIHSCDLTVEGLATVTRIAPGSAKVIDVYRTGAKCVPGEAGDSGKPGAAFHQ
VGLLRVKPGRGDRTRSMSCSDKMARWNVLGCQGALLMHLLEEPIYLSAVVIGKCPYSQEAMQRALIGRCQ
NVSALPKGFGVQELKILQSDLLFEQSRSAVQAKRADSPGRLVPCGAAISWSAVPEQPLDVTANGFPQGTT
KKTIGSLQARSQISKVELFRSFQKLLSRIARDKWPHSLRVQKLDTYQEYKEAASSYQEAWSTLRKQVFGS
WIRNPPDYHQFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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