CCDS Report for Consensus CDS

PubMed

Entrez

Gene

BLAST

OMIM

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Genome Displays

	Ensembl
	NCBI
	UCSC
	VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS11076.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
11076.1	Public	Homo sapiens	17	PITPNM3	24	110	108

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11076.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000262483.13	ENSP00000262483.8	MANE Select	Accepted	alive
		NCBI	NM_031220.4	NP_112497.2	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_112497.2	974	Q9BZ71-1	974	100%	0	0

Chromosomal Locations for CCDS 11076.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)

Genome Browser links:

Chromosome	Start	Stop
17	6455338	6455643
17	6457594	6457722
17	6461373	6461556
17	6463732	6463881
17	6464170	6464318
17	6464655	6464771
17	6468225	6468341
17	6470260	6470408
17	6471161	6471355
17	6472657	6472827
17	6474432	6474604
17	6477029	6477213
17	6477975	6478097
17	6478547	6478736
17	6483517	6483752
17	6484216	6484292
17	6503527	6503574
17	6525356	6525463
17	6537987	6538082
17	6556385	6556406

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2925 nt):
ATGGCCAAGGCGGGCCGTGCAGGTGGTCCTCCCCCGGGCGGCGGTGCCCCCTGGCACCTTCGAAATGTCC TCAGTGACTCTGTGGAGAGCTCAGATGATGAATTCTTTGATGCCAGAGAGGAGATGGCTGAAGGGAAGAA TGCCATCCTCATTGGGATGAGCCAGTGGAACTCCAATGACCTCGTGGAGCAGATCGAGACCATGGGGAAA CTGGACGAGCATCAAGGAGAAGGGACCGCGCCGTGCACATCCAGCATCCTCCAGGAGAAGCAGCGAGAAC TGTACCGGGTTTCCTTGAGAAGACAGAGGTTCCCAGCCCAGGGAAGCATCGAGATCCACGAAGACAGCGA GGAAGGCTGCCCGCAGCGCTCCTGCAAGACACATGTCCTCCTGCTGGTCCTGCATGGGGGAAACATCCTG GACACGGGTGCCGGGGACCCGTCCTGCAAGGCAGCCGACATCCACACCTTCAGCTCCGTGCTGGAGAAGG TCACACGAGCCCATTTCCCTGCTGCCCTGGGCCACATCCTCATCAAGTTCGTCCCCTGTCCTGCCATCTG CTCTGAGGCTTTCTCGCTTGTCTCTCACCTGAACCCCTACAGCCACGATGAGGGCTGCCTCAGCAGCAGC CAGGACCACGTCCCTCTGGCCGCCCTTCCCCTGTTGGCCATCTCCTCCCCGCAGTACCAGGATGCTGTCG CCACCGTCATCGAGCGAGCCAACCAGGTCTACAGAGAGTTCCTGAAGTCCTCTGATGGGATTGGCTTCAG TGGGCAGGTGTGTCTCATCGGGGACTGTGTGGGGGGCCTCCTGGCCTTCGATGCCATCTGCTACAGTGCG GGGCCCTCAGGGGACAGCCCTGCCAGCAGCAGCCGGAAGGGGAGCATCAGCAGCACCCAGGACACCCCAG TCGCGGTGGAGGAAGATTGCAGCCTGGCCAGCAGCAAGCGTCTCAGCAAAAGCAACATTGACATCTCCAG TGGGTTGGAGGATGAGGAGCCCAAGAGGCCGTTGCCGCGGAAACAGAGCGACTCCTCCACCTATGACTGC GAGGCCATCACCCAGCACCATGCCTTCCTCTCAAGCATCCACTCCAGCGTGCTAAAGGATGAGTCTGAGA CCCCGGCGGCTGGGGGGCCGCAGCTCCCTGAGGTCAGCCTGGGCCGCTTTGACTTCGATGTGTCCGACTT CTTCCTCTTCGGCTCGCCACTGGGCCTGGTCCTGGCCATGCGGAGGACGGTGCTGCCTGGGCTGGACGGC TTCCAGGTGCGTCCTGCCTGCAGCCAGGTCTACAGCTTCTTCCATTGCGCAGACCCCTCTGCCTCACGGC TCGAGCCACTGCTGGAGCCCAAGTTCCACCTGGTGCCGCCTGTCAGCGTGCCTCGCTACCAGAGGTTCCC ACTGGGCGATGGGCAGTCCCTCCTCCTCGCTGATGCCCTACACACCCACAGCCCCCTCTTCCTGGAGGGC AGCTCCCGGGACAGCCCGCCACTTCTGGATGCCCCTGCCTCGCCCCCTCAGGCCTCGAGGTTCCAGCGCC CAGGACGGAGGATGAGCGAGGGGAGCTCCCACAGCGAGAGCTCGGAGTCCTCGGACAGCATGGCACCCGT GGGTGCCTCCCGCATCACAGCCAAGTGGTGGGGAAGCAAGAGGATCGACTATGCCCTGTACTGCCCTGAT GTCCTCACGGCCTTCCCCACCGTGGCCCTGCCCCACCTCTTCCACGCCAGTTACTGGGAGTCCACAGACG TGGTGGCCTTCATCCTGAGACAGGTAATGCGCTATGAGAGCGTGAACATCAAGGAAAGCGCCCGCCTGGA CCCTGCAGCACTGAGTCCTGCCAACCCCCGGGAGAAGTGGCTTCGTAAGCGGACTCAGGTCAAGCTGAGG AATGTCACGGCTAATCACCGGGCCAATGATGTGATTGCTGCTGAAGATGGCCCCCAGGTCCTGGTGGGGC GGTTCATGTACGGGCCCCTCGACATGGTGGCTCTGACTGGAGAGAAGGTGGACATCCTAGTAATGGCAGA GCCATCCTCAGGCCGCTGGGTACACCTGGACACAGAGATCACCAACAGCAGTGGTCGCATCACATACAAT GTGCCGCGGCCCCGGCGCCTGGGGGTTGGTGTCTATCCTGTGAAGATGGTCGTCAGGGGCGACCAGACCT GTGCCATGAGCTACCTCACGGTGTTGCCCAGGGGCATGGAGTGTGTAGTGTTCAGCATTGATGGGTCCTT CGCGGCCAGCGTGTCTATCATGGGAAGCGACCCCAAGGTCCGGCCGGGTGCAGTGGATGTTGTCCGGCAC TGGCAGGACTTGGGCTACATGATCCTTTACATCACGGGACGGCCGGACATGCAGAAGCAGCGGGTGGTGT CGTGGCTGTCCCAGCACAACTTCCCACAGGGCATGATCTTCTTCTCCGATGGGCTGGTGCATGACCCGCT GCGGCAGAAGGCCATCTTCCTGCGCAACCTCATGCAGGAGTGCTTCATCAAAATCAGTGCGGCCTATGGC TCCACGAAGGACATCTCTGTCTACAGCGTGCTGGGCCTGCCTGCCTCCCAGATCTTCATTGTGGGCCGGC CCACCAAGAAGTACCAAACCCAGTGCCAGTTCCTGAGCGAGGGCTACGCCGCACACCTGGCCGCGCTGGA GGCCAGCCACCGCTCACGCCCAAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTCGGGCTG CACGCGCAGCCAGAGTTCCTGCGGAAGCGCAACCACCTGCGCAGAACCATGTCAGTGCAGCAGCCCGACC CGCCCGCCGCCAACCCCAAGCCCGAGCGGGCCCAGAGCCAGCCCGAGTCGGACAAAGACCACGAGCGGCC GCTGCCGGCGCTCAGCTGGGCGCGTGGGCCCCCCAAGTTCGAGTCGGTGCCCTGA
Translation (974 aa):
MAKAGRAGGPPPGGGAPWHLRNVLSDSVESSDDEFFDAREEMAEGKNAILIGMSQWNSNDLVEQIETMGK LDEHQGEGTAPCTSSILQEKQRELYRVSLRRQRFPAQGSIEIHEDSEEGCPQRSCKTHVLLLVLHGGNIL DTGAGDPSCKAADIHTFSSVLEKVTRAHFPAALGHILIKFVPCPAICSEAFSLVSHLNPYSHDEGCLSSS QDHVPLAALPLLAISSPQYQDAVATVIERANQVYREFLKSSDGIGFSGQVCLIGDCVGGLLAFDAICYSA GPSGDSPASSSRKGSISSTQDTPVAVEEDCSLASSKRLSKSNIDISSGLEDEEPKRPLPRKQSDSSTYDC EAITQHHAFLSSIHSSVLKDESETPAAGGPQLPEVSLGRFDFDVSDFFLFGSPLGLVLAMRRTVLPGLDG FQVRPACSQVYSFFHCADPSASRLEPLLEPKFHLVPPVSVPRYQRFPLGDGQSLLLADALHTHSPLFLEG SSRDSPPLLDAPASPPQASRFQRPGRRMSEGSSHSESSESSDSMAPVGASRITAKWWGSKRIDYALYCPD VLTAFPTVALPHLFHASYWESTDVVAFILRQVMRYESVNIKESARLDPAALSPANPREKWLRKRTQVKLR NVTANHRANDVIAAEDGPQVLVGRFMYGPLDMVALTGEKVDILVMAEPSSGRWVHLDTEITNSSGRITYN VPRPRRLGVGVYPVKMVVRGDQTCAMSYLTVLPRGMECVVFSIDGSFAASVSIMGSDPKVRPGAVDVVRH WQDLGYMILYITGRPDMQKQRVVSWLSQHNFPQGMIFFSDGLVHDPLRQKAIFLRNLMQECFIKISAAYG STKDISVYSVLGLPASQIFIVGRPTKKYQTQCQFLSEGYAAHLAALEASHRSRPKKNNSRMILRKGSFGL HAQPEFLRKRNHLRRTMSVQQPDPPAANPKPERAQSQPESDKDHERPLPALSWARGPPKFESVP

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH