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Report for CCDS11095.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11095.2 Public Homo sapiens 17 ELP5 24 110 108 CCDS HistoryNCBI Gene:23587Re-query CCDS DB by CCDS ID:11095.2Re-query CCDS DB by GeneID:23587See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 11095.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356683.7 ENSP00000349111.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356683.7Link to Ensembl Protein Viewer:ENSP00000349111.3Re-query CCDS DB by Nucleotide ID:ENST00000356683Re-query CCDS DB by Protein ID:ENSP00000349111
Original member Current member EBI ENST00000574993.6 ENSP00000459835.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574993.6Link to Ensembl Protein Viewer:ENSP00000459835.2Re-query CCDS DB by Nucleotide ID:ENST00000574993Re-query CCDS DB by Protein ID:ENSP00000459835
Original member Current member NCBI NM_203413.3 NP_981958.2 Accepted alive Link to Nucleotide Sequence:NM_203413.3Link to Protein Sequence:NP_981958.2Re-query CCDS DB by Nucleotide ID:NM_203413Re-query CCDS DB by Protein ID:NP_981958Link to BLAST:NP_981958.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_981958.2 263 Q8TE02-2 263 100% 0 0

Chromosomal Locations for CCDS 11095.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7252551 7252596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7252770 7252830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7252918 7252998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7254583 7254803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7256857 7257038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7258588 7258788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGTTGGACTCGCTGTTGGCCTTGGGCGGCCTGGTGCTGCTTCGGGATTCCGTGGAGTGGGAGGGGCGCA
GTCTCTTGAAGGCGCTTGTCAAGAAATCTGCACTGTGTGGGGAGCAAGTGCATATCCTGGGCTGTGAAGT
GAGCGAGGAAGAGTTTCGTGAAGGTTTTGACTCTGATATCAACAATCGGCTGGTTTACCATGACTTCTTC
AGAGACCCTCTCAACTGGTCAAAAACTGAGGAGGCCTTTCCTGGGGGGCCGCTGGGAGCCTTGAGAGCCA
TGTGCAAGAGGACAGATCCTGTTCCTGTCACCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTCGCCT
TCCCTGCACCACACTCTGCCAGGTCCTGCATGCTGTGAGCCATCAGGACTCTTGTCCTGGTGACAGCTCC
TCAGTGGGGAAAGTGAGTGTGCTGGGCTTGCTACATGAAGAGCTTCATGGACCAGGCCCTGTGGGAGCTC
TCAGCAGCCTTGCTCAGACTGAGGTGACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTGTG
TCGGAGGCCCCGACAGCGCCCAACTGACCAGACTCAGTGGTTCTCCATCCTTCCGGACTTCAGCCTGGAT
CTCCAAGAGGGGCCCTCTGTAGAGTCCCAGCCCTACTCCGATCCTCATATACCCCCGGTATCTAAGAATG
CCAAGGCCAGAACAAGGAAATGTAGTTTAGTATCTGGTCACGGGAGAGAAAATAAAAGCTGCAGAGGTTG
GGGGTGGGGTCAGGGATTCTAG

Translation (263 aa):
MLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILGCEVSEEEFREGFDSDINNRLVYHDFF
RDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVTIALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSS
SVGKVSVLGLLHEELHGPGPVGALSSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLD
LQEGPSVESQPYSDPHIPPVSKNAKARTRKCSLVSGHGRENKSCRGWGWGQGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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