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Report for CCDS11128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11128.1 Public Homo sapiens 17 ALOX15B 24 110 108 CCDS HistoryNCBI Gene:247Re-query CCDS DB by CCDS ID:11128.1Re-query CCDS DB by GeneID:247See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380183.9 ENSP00000369530.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380183.9Link to Ensembl Protein Viewer:ENSP00000369530.4Re-query CCDS DB by Nucleotide ID:ENST00000380183Re-query CCDS DB by Protein ID:ENSP00000369530
Original member Current member NCBI NM_001141.3 NP_001132.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001141.3Link to Protein Sequence:NP_001132.2Re-query CCDS DB by Nucleotide ID:NM_001141Re-query CCDS DB by Protein ID:NP_001132Link to BLAST:NP_001132.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001132.2 676 O15296-1 676 100% 0 0

Chromosomal Locations for CCDS 11128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 8039156 8039302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8039386 8039605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8039902 8039983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8042369 8042491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8042781 8042884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8044829 8045001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8045238 8045384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8045483 8045686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8046668 8046754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8046907 8047076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8047258 8047379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8047564 8047664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8047745 8047915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8048386 8048565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2031 nt):
ATGGCCGAGTTCAGGGTCAGGGTGTCCACCGGAGAAGCCTTCGGGGCTGGCACATGGGACAAAGTGTCTG
TCAGCATCGTGGGGACCCGGGGAGAGAGCCCCCCACTGCCCCTGGACAATCTCGGCAAGGAGTTCACTGC
GGGCGCTGAGGAGGACTTCCAGGTGACGCTCCCGGAGGACGTAGGCCGAGTGCTGCTGCTGCGCGTGCAC
AAGGCGCCCCCAGTGCTGCCCCTGCTGGGGCCCCTGGCCCCGGATGCCTGGTTCTGCCGCTGGTTCCAGC
TGACACCGCCGCGGGGCGGCCACCTCCTCTTCCCCTGCTACCAGTGGCTGGAGGGGGCGGGGACCCTGGT
GCTGCAGGAGGGTACAGCCAAGGTGTCCTGGGCAGACCACCACCCTGTGCTCCAGCAACAGCGCCAGGAG
GAGCTTCAGGCCCGGCAGGAGATGTACCAGTGGAAGGCTTACAACCCAGGTTGGCCTCACTGCCTGGATG
AAAAGACAGTGGAAGACTTGGAGCTCAATATCAAATACTCCACAGCCAAGAATGCCAACTTTTATCTACA
GGCTGGCTCTGCTTTTGCAGAGATGAAAATCAAGGGGTTGCTGGACCGCAAGGGGCTCTGGAGGAGTCTG
AATGAGATGAAAAGGATCTTCAACTTCCGGAGGACCCCAGCAGCTGAGCACGCATTTGAGCACTGGCAGG
AGGACGCCTTCTTCGCCTCCCAGTTCCTGAATGGTCTCAACCCTGTCCTGATCCGCCGCTGTCACTACCT
CCCAAAGAACTTCCCCGTCACTGATGCCATGGTGGCCTCAGTGTTGGGTCCTGGGACCAGCTTGCAGGCT
GAGCTAGAGAAGGGCTCCCTGTTCTTGGTGGATCACGGCATCCTCTCTGGCATCCAGACCAATGTCATTA
ATGGGAAGCCTCAGTTCTCTGCGGCCCCAATGACCCTGCTATACCAGAGCCCAGGCTGCGGGCCGCTGCT
GCCTCTCGCCATCCAGCTCAGCCAGACCCCCGGCCCAAACAGCCCCATCTTCCTGCCCACTGATGACAAG
TGGGACTGGTTGCTGGCCAAGACCTGGGTGCGCAATGCCGAGTTCTCCTTCCATGAGGCCCTCACGCACC
TGCTGCACTCACATCTGCTGCCTGAGGTCTTCACCCTGGCTACCCTGCGTCAGCTGCCCCACTGCCACCC
TCTCTTCAAGCTGCTGATCCCGCACACCCGATACACCCTGCACATCAACACACTCGCCCGGGAGCTGCTT
ATCGTGCCAGGGCAGGTGGTGGACAGGTCCACAGGCATCGGCATTGAAGGCTTCTCTGAGTTGATACAGA
GGAACATGAAGCAGCTGAACTATTCTCTCCTGTGTCTGCCTGAGGATATCCGGACCCGAGGAGTTGAAGA
CATCCCAGGCTACTACTACCGTGATGATGGGATGCAGATCTGGGGTGCAGTGGAACGCTTTGTCTCTGAA
ATCATCGGTATCTACTACCCAAGTGATGAGTCTGTCCAAGATGACAGAGAGCTCCAGGCCTGGGTCAGAG
AGATCTTCTCCAAGGGCTTCCTAAACCAGGAGAGCTCAGGTATACCCTCCTCACTGGAGACCCGGGAAGC
CCTGGTGCAGTATGTCACCATGGTGATATTCACCTGCTCCGCCAAGCATGCGGCTGTCAGTGCAGGGCAG
TTTGACTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCATGCAGCTGCCACCACCCACCTCCAAAGGCC
TGGCAACATGCGAGGGCTTCATAGCCACCCTCCCACCTGTCAATGCCACATGTGATGTCATCCTTGCTCT
CTGGTTGCTGAGCAAGGAGCCTGGAGACCAAAGGCCCCTGGGCACCTATCCGGATGAGCACTTCACAGAG
GAGGCCCCTCGGCGGAGCATCGCCACCTTCCAGAGCCGCCTGGCCCAGATCTCGAGGGGCATCCAGGAGC
GGAACCAGGGCCTGGTGCTGCCCTACACCTACCTAGACCCTCCCCTCATCGAGAACAGCGTCTCCATCTA
A

Translation (676 aa):
MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPEDVGRVLLLRVH
KAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQEGTAKVSWADHHPVLQQQRQE
ELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAKNANFYLQAGSAFAEMKIKGLLDRKGLWRSL
NEMKRIFNFRRTPAAEHAFEHWQEDAFFASQFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQA
ELEKGSLFLVDHGILSGIQTNVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDK
WDWLLAKTWVRNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELL
IVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQIWGAVERFVSE
IIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQYVTMVIFTCSAKHAAVSAGQ
FDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNATCDVILALWLLSKEPGDQRPLGTYPDEHFTE
EAPRRSIATFQSRLAQISRGIQERNQGLVLPYTYLDPPLIENSVSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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