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Report for CCDS112.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
112.1 Public Homo sapiens 1 KIF1B 24 110 108 CCDS HistoryNCBI Gene:23095Re-query CCDS DB by CCDS ID:112.1Re-query CCDS DB by GeneID:23095See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 112.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377083.5 ENSP00000366287.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377083.5Link to Ensembl Protein Viewer:ENSP00000366287.1Re-query CCDS DB by Nucleotide ID:ENST00000377083Re-query CCDS DB by Protein ID:ENSP00000366287
Original member Current member EBI ENST00000377093.9 ENSP00000366297.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377093.9Link to Ensembl Protein Viewer:ENSP00000366297.4Re-query CCDS DB by Nucleotide ID:ENST00000377093Re-query CCDS DB by Protein ID:ENSP00000366297
Original member Current member NCBI NM_001365953.1 NP_001352882.1 Accepted alive Link to Nucleotide Sequence:NM_001365953.1Link to Protein Sequence:NP_001352882.1Re-query CCDS DB by Nucleotide ID:NM_001365953Re-query CCDS DB by Protein ID:NP_001352882Link to BLAST:NP_001352882.1
Original member Current member NCBI NM_183416.4 NP_904325.2 Accepted alive Link to Nucleotide Sequence:NM_183416.4Link to Protein Sequence:NP_904325.2Re-query CCDS DB by Nucleotide ID:NM_183416Re-query CCDS DB by Protein ID:NP_904325Link to BLAST:NP_904325.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352882.1 1153 O60333-3 1153 100% 0 0
NP_904325.2 1153 O60333-3 1153 100% 0 0

Chromosomal Locations for CCDS 112.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 10232329 10232434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10256247 10256323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10258493 10258672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10261905 10261970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10267380 10267558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10268152 10268263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10271502 10271579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10272241 10272306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10275428 10275503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10276321 10276399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10277986 10278128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10282400 10282533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10291082 10291161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10292047 10292122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10295086 10295165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10295660 10295766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10296582 10296665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10296897 10297077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10297174 10297246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10303163 10304647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3462 nt):
ATGTCGGGAGCCTCAGTGAAGGTGGCTGTCCGGGTAAGGCCCTTCAATTCTCGAGAGACCAGCAAGGAAT
CCAAATGCATCATTCAGATGCAAGGCAACTCGACCAGTATTATTAACCCAAAGAATCCAAAGGAAGCTCC
AAAGTCCTTCAGCTTCGACTATTCCTACTGGTCTCATACCTCACCCGAAGATCCCTGTTTTGCATCTCAA
AACCGTGTGTACAATGACATTGGCAAGGAAATGCTCTTACACGCCTTTGAGGGATATAATGTCTGTATTT
TTGCCTATGGGCAGACTGGTGCTGGAAAATCTTATACAATGATGGGTAAACAAGAAGAAAGCCAGGCTGG
CATCATTCCACAGTTATGTGAAGAACTTTTTGAGAAAATCAATGACAACTGTAATGAAGAAATGTCTTAC
TCTGTAGAGGTGAGCTACATGGAAATTTACTGTGAAAGAGTACGAGATTTGCTGAATCCAAAAAACAAGG
GTAATTTGCGTGTGCGTGAACACCCACTTCTTGGACCCTATGTGGAGGATCTGTCCAAGTTGGCAGTTAC
TTCCTACACAGACATTGCTGACCTCATGGATGCTGGGAACAAAGCCAGGACAGTGGCAGCTACAAACATG
AATGAAACAAGTAGCCGTTCCCACGCTGTGTTTACGATTGTTTTCACCCAGAAGAAACACGATAATGAGA
CCAACCTTTCCACTGAGAAGGTCAGTAAAATCAGCTTGGTGGATCTAGCAGGAAGTGAACGAGCTGATTC
AACTGGTGCCAAAGGGACTCGATTAAAGGAAGGAGCAAATATTAATAAGTCTCTTACAACTTTGGGCAAA
GTCATTTCAGCCTTGGCCGAGGTGAGTAAAAAGAAGAAGAAAACAGATTTTATTCCCTACAGGGATTCTG
TACTTACTTGGCTCCTTCGAGAAAATTTAGGTGGCAATTCTCGGACTGCAATGGTTGCTGCTCTGAGCCC
CGCGGATATCAACTACGATGAGACTTTGAGCACTCTGAGATATGCAGATCGTGCAAAACAAATTAAATGC
AATGCTGTTATCAATGAGGACCCCAATGCCAAACTGGTTCGTGAATTAAAGGAGGAGGTGACACGGCTGA
AGGACCTTCTTCGTGCTCAGGGCCTGGGAGATATTATTGATACATCCATGGGGTCCCTCACTTCATCCCC
ATCTTCCTGCTCACTCAGTAGTCAGGTGGGCTTGACGTCTGTGACCAGTATTCAAGAGAGGATCATGTCT
ACACCTGGAGGAGAGGAAGCTATTGAACGTTTAAAGGAATCAGAGAAGATCATTGCTGAGTTGAATGAAA
CTTGGGAAGAGAAGCTTCGTAAAACAGAGGCCATCAGAATGGAGAGAGAGGCTTTGTTGGCTGAGATGGG
AGTTGCCATTCGGGAAGATGGAGGAACCCTAGGGGTTTTCTCACCTAAAAAGACCCCACATCTTGTTAAC
CTCAATGAAGACCCACTAATGTCTGAGTGCCTACTTTATTACATCAAAGATGGAATTACAAGGGTTGGCC
AAGCAGATGCTGAGCGGCGCCAGGACATAGTGCTGAGCGGGGCTCACATTAAAGAAGAGCATTGTATCTT
CCGGAGTGAGAGAAGCAACAGCGGGGAAGTTATCGTGACCTTAGAGCCCTGTGAGCGCTCAGAAACCTAC
GTAAATGGCAAGAGGGTGTCCCAGCCTGTTCAGCTGCGCTCAGGAAACCGTATCATCATGGGTAAAAACC
ATGTTTTCCGCTTTAACCACCCGGAACAAGCACGAGCTGAGCGAGAGAAGACTCCTTCTGCTGAGACCCC
CTCTGAGCCTGTGGACTGGACATTTGCCCAGAGGGAGCTTCTGGAAAAACAAGGAATTGATATGAAACAA
GAGATGGAGAAAAGGCTACAGGAAATGGAGATCTTATACAAAAAGGAGAAGGAAGAAGCAGATCTTCTTT
TGGAGCAGCAGAGACTGGACGCGGATTCTGATAGCGGGGACGATTCTGACAAGAGGTCGTGTGAAGAGAG
CTGGAAACTGATTACTTCTCTGAGAGAAAAGCTACCTCCCAGCAAGTTGCAAACCATTGTTAAAAAATGT
GGCCTCCCAAGCAGTGGGAAGAAACGTGAACCAATTAAAATGTATCAGATACCCCAAAGAAGGCGCTTGA
GTAAAGATTCCAAGTGGGTCACAATCTCAGATCTTAAAATTCAGGCTGTCAAAGAGATTTGCTATGAGGT
TGCTCTCAATGACTTCAGGCACAGTCGGCAGGAGATTGAAGCCCTGGCCATTGTCAAGATGAAGGAGCTT
TGTGCCATGTATGGCAAGAAAGACCCCAATGAGCGGGACTCCTGGAGGGCAGTGGCCAGGGACGTCTGGG
ATACCGTCGGTGTTGGGGATGAGAAGATCGAAGACGTCATGGCCACTGGGAAAGGCAGCACTGATGTAGA
TGACCTCAAGGTTCATATAGACAAGCTGGAAGATATTTTGCAAGAAGTCAAAAAGCAAAATAACATGAAA
GACGAGGAGATAAAAGTCTTAAGAAATAAAATGCTCAAAATGGAAAAAGTCTTGCCACTGATCGGATCTC
AGGAACAGAAAAGCCCAGGAAGCCACAAAGCAAAGGAGCCTGTTGGTGCTGGTGTTAGTAGCACCTCTGA
GAATAATGTAAGTAAAGGAGACAATGGAGAACTTGCAAAAGAAGAACGTGTTTCCCAGCTGATGAATGGG
GATCCAGCTTTTAGACGTGGACGTCTGCGCTGGATGAGGCAAGAGCAAATTCGGTTTAAGAACTTGCAAC
AGCAGGAGATAACAAAGCAGCTTCGTCGGCAGAATGTACCTCATAGGTTCATCCCTCCTGAGAACCGGAA
GCCCCGCTTCCCCTTTAAGAGCAACCCTAAACACAGAAACTCTTGGAGTCCTGGGACACATATCATCATA
ACAGAAGATGAGGTTATAGAGCTTAGGATTCCAAAAGACGATGAAGCAAGGAAAGGGAATAAAGAAGAGA
GCCAAGAAAAAGGGGGTAAAGGAGCTTTTAAGGATCCCCAGTTTCCATGGGGCTCTCAAGGAATGAGAAG
TCAAGATCACATCCAAGTTAGCAAGCAGCACATTAATAATCAGCAACAGCCACCTCAACTACGTTGGAGA
AGCAATTCTCTCAATAATGGCCAGCCGAAAAGTACGCGCTGCCAGGCATCTGCCTCCGCGGAGTCATTAA
ACTCCCACAGTGGTCACCCCACTGCTGATGTACAGACTTTCCAGGCAAAGCGCCATATTCATCAACACCG
TCAGTCTTACTGTAATTATAACACTGGAGGTCAGTTAGAGGGCAATGCAGCCACTTCCTATCAGAAGCAG
ACTGACAAACCCAGCCACTGTAGCCAGTTTGTGACACCTCCGCGGATGAGGAGACAGTTCTCAGCACCCA
ATCTCAAAGCTGGTCGAGAAACCACAGTATAA

Translation (1153 aa):
MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKEAPKSFSFDYSYWSHTSPEDPCFASQ
NRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSY
SVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNM
NETSSRSHAVFTIVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGK
VISALAEVSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKC
NAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDTSMGSLTSSPSSCSLSSQVGLTSVTSIQERIMS
TPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMGVAIREDGGTLGVFSPKKTPHLVN
LNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHIKEEHCIFRSERSNSGEVIVTLEPCERSETY
VNGKRVSQPVQLRSGNRIIMGKNHVFRFNHPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQ
EMEKRLQEMEILYKKEKEEADLLLEQQRLDADSDSGDDSDKRSCEESWKLITSLREKLPPSKLQTIVKKC
GLPSSGKKREPIKMYQIPQRRRLSKDSKWVTISDLKIQAVKEICYEVALNDFRHSRQEIEALAIVKMKEL
CAMYGKKDPNERDSWRAVARDVWDTVGVGDEKIEDVMATGKGSTDVDDLKVHIDKLEDILQEVKKQNNMK
DEEIKVLRNKMLKMEKVLPLIGSQEQKSPGSHKAKEPVGAGVSSTSENNVSKGDNGELAKEERVSQLMNG
DPAFRRGRLRWMRQEQIRFKNLQQQEITKQLRRQNVPHRFIPPENRKPRFPFKSNPKHRNSWSPGTHIII
TEDEVIELRIPKDDEARKGNKEESQEKGGKGAFKDPQFPWGSQGMRSQDHIQVSKQHINNQQQPPQLRWR
SNSLNNGQPKSTRCQASASAESLNSHSGHPTADVQTFQAKRHIHQHRQSYCNYNTGGQLEGNAATSYQKQ
TDKPSHCSQFVTPPRMRRQFSAPNLKAGRETTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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