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Report for CCDS11244.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11244.1 Public Homo sapiens 17 ERAL1 24 110 108 CCDS HistoryNCBI Gene:26284Re-query CCDS DB by CCDS ID:11244.1Re-query CCDS DB by GeneID:26284See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11244.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254928.10 ENSP00000254928.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254928.10Link to Ensembl Protein Viewer:ENSP00000254928.5Re-query CCDS DB by Nucleotide ID:ENST00000254928Re-query CCDS DB by Protein ID:ENSP00000254928
Original member Current member NCBI NM_005702.4 NP_005693.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005702.4Link to Protein Sequence:NP_005693.1Re-query CCDS DB by Nucleotide ID:NM_005702Re-query CCDS DB by Protein ID:NP_005693Link to BLAST:NP_005693.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005693.1 437 O75616-1 437 100% 0 0

Chromosomal Locations for CCDS 11244.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 28855035 28855317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28856264 28856391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28856505 28856582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28857939 28857985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28858146 28858207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28858374 28858486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28858576 28858824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28858964 28859113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28859203 28859283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28860431 28860553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1314 nt):
ATGGCTGCCCCCAGCTGGCGCGGGGCTAGGCTTGTTCAATCGGTGTTAAGAGTCTGGCAGGTGGGCCCTC
ATGTCGCGAGGGAGCGGGTGATCCCTTTTTCCTCACTCTTAGGCTTCCAACGGAGGTGCGTGTCCTGCGT
CGCGGGGTCCGCTTTCTCTGGTCCCCGCTTGGCCTCGGCTTCTCGCAGTAATGGCCAGGGCTCTGCCCTG
GACCACTTCCTCGGATTCTCTCAGCCCGACAGTTCGGTGACTCCTTGCGTCCCCGCGGTGTCCATGAACA
GAGATGAGCAGGATGTCCTCTTGGTCCATCACCCTGATATGCCTGAGAATTCCCGGGTCCTACGAGTGGT
CCTCCTGGGAGCCCCGAATGCAGGGAAGTCAACACTCTCCAACCAGCTACTGGGCCGAAAGGTGTTCCCT
GTTTCCAGGAAGGTGCATACTACTCGCTGCCAAGCTCTGGGGGTCATCACAGAGAAGGAGACCCAGGTGA
TTCTACTTGACACACCTGGCATTATCAGTCCTGGTAAACAGAAGAGGCATCACCTGGAGCTCTCTTTGTT
GGAAGATCCATGGAAGAGCATGGAATCTGCTGATCTTGTTGTGGTTCTTGTGGATGTCTCAGACAAGTGG
ACACGGAACCAGCTCAGCCCCCAGTTGCTCAGGTGCTTGACCAAGTACTCCCAGATCCCTAGTGTCCTGG
TCATGAACAAGGTAGATTGTTTGAAGCAGAAGTCAGTTCTCCTGGAGCTCACGGCAGCCCTCACTGAAGG
TGTGGTCAATGGCAAAAAGCTCAAGATGAGGCAGGCCTTCCACTCACACCCTGGCACCCATTGCCCCAGC
CCAGCAGTTAAGGACCCAAACACACAATCTGTGGGAAATCCTCAGAGGATTGGCTGGCCCCACTTCAAGG
AGATCTTCATGTTGTCAGCCCTAAGCCAGGAGGACGTGAAAACACTAAAGCAATACCTTCTGACACAGGC
CCAGCCAGGGCCCTGGGAGTACCACAGTGCAGTCCTCACTAGCCAGACACCAGAAGAGATCTGTGCCAAC
ATTATCCGAGAGAAGCTCCTAGAACACCTGCCCCAGGAGGTGCCTTACAATGTACAGCAGAAGACAGCAG
TGTGGGAGGAAGGACCAGGTGGGGAGCTGGTTATCCAACAGAAGCTTCTGGTGCCCAAAGAATCTTATGT
GAAACTCCTGATTGGTCCGAAGGGCCACGTGATCTCCCAGATAGCACAGGAGGCAGGCCATGACCTCATG
GACATCTTCCTCTGCGATGTTGACATCCGCCTCTCTGTGAAGCTCCTCAAGTGA

Translation (437 aa):
MAAPSWRGARLVQSVLRVWQVGPHVARERVIPFSSLLGFQRRCVSCVAGSAFSGPRLASASRSNGQGSAL
DHFLGFSQPDSSVTPCVPAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFP
VSRKVHTTRCQALGVITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKW
TRNQLSPQLLRCLTKYSQIPSVLVMNKVDCLKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPS
PAVKDPNTQSVGNPQRIGWPHFKEIFMLSALSQEDVKTLKQYLLTQAQPGPWEYHSAVLTSQTPEEICAN
IIREKLLEHLPQEVPYNVQQKTAVWEEGPGGELVIQQKLLVPKESYVKLLIGPKGHVISQIAQEAGHDLM
DIFLCDVDIRLSVKLLK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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