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Report for CCDS11304.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11304.1 Public Homo sapiens 17 CCL15 24 110 108 CCDS HistoryNCBI Gene:6359Re-query CCDS DB by CCDS ID:11304.1Re-query CCDS DB by GeneID:6359See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11304.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616694.1 ENSP00000481402.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616694.1Link to Ensembl Protein Viewer:ENSP00000481402.1Re-query CCDS DB by Nucleotide ID:ENST00000616694Re-query CCDS DB by Protein ID:ENSP00000481402
Original member Current member EBI ENST00000610751.4 ENSP00000481940.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610751.4Link to Ensembl Protein Viewer:ENSP00000481940.1Re-query CCDS DB by Nucleotide ID:ENST00000610751Re-query CCDS DB by Protein ID:ENSP00000481940
Original member Current member EBI ENST00000617897.2 ENSP00000484078.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000617897.2Link to Ensembl Protein Viewer:ENSP00000484078.1Re-query CCDS DB by Nucleotide ID:ENST00000617897Re-query CCDS DB by Protein ID:ENSP00000484078
Original member Current member NCBI NM_032965.6 NP_116741.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032965.6Link to Protein Sequence:NP_116741.2Re-query CCDS DB by Nucleotide ID:NM_032965Re-query CCDS DB by Protein ID:NP_116741Link to BLAST:NP_116741.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116741.2 113 Q16663 113 100% 0 0

Chromosomal Locations for CCDS 11304.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 35997767 35997860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35998280 35998391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35998866 35998925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36001417 36001492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (342 nt):
ATGAAGGTCTCCGTGGCTGCCCTCTCCTGCCTCATGCTTGTTGCTGTCCTTGGATCCCAGGCCCAGTTCA
CAAATGATGCAGAGACAGAGTTAATGATGTCAAAGCTTCCACTGGAAAATCCAGTAGTTCTGAACAGCTT
TCACTTTGCTGCTGACTGCTGCACCTCCTACATCTCACAAAGCATCCCGTGTTCACTCATGAAAAGTTAT
TTTGAAACGAGCAGCGAGTGCTCCAAGCCAGGTGTCATATTCCTCACCAAGAAGGGGCGGCAAGTCTGTG
CCAAACCCAGTGGTCCGGGAGTTCAGGATTGCATGAAAAAGCTGAAGCCCTACTCAATATAA

Translation (113 aa):
MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQSIPCSLMKSY
FETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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