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Report for CCDS11766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11766.1 Public Homo sapiens 17 TBC1D16 24 110 108 CCDS HistoryNCBI Gene:125058Re-query CCDS DB by CCDS ID:11766.1Re-query CCDS DB by GeneID:125058See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310924.7 ENSP00000309794.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310924.7Link to Ensembl Protein Viewer:ENSP00000309794.2Re-query CCDS DB by Nucleotide ID:ENST00000310924Re-query CCDS DB by Protein ID:ENSP00000309794
Original member Current member NCBI NM_019020.4 NP_061893.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019020.4Link to Protein Sequence:NP_061893.2Re-query CCDS DB by Nucleotide ID:NM_019020Re-query CCDS DB by Protein ID:NP_061893Link to BLAST:NP_061893.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061893.2 767 Q8TBP0-1 767 100% 0 0

Chromosomal Locations for CCDS 11766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 79940859 79941107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79942060 79942206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79944908 79945087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79947645 79947831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79948872 79949006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79949717 79949865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79950411 79950578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79951450 79951597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79952657 79952818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80010160 80010757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80013367 80013547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2304 nt):
ATGTCTCTGGGCCGCCTCCTTCGCAGGGCCTCCTCCAAAGCCTCGGACCTCCTGACCCTCACCCCCGGTG
GCAGCGGCAGCGGGTCCCCCTCTGTCCTGGATGGAGAGATCATCTACTCCAAGAACAATGTCTGCGTGCA
CCCGCCGGAGGGGCTGCAGGGGCTGGGGGAGCACCACCCAGGTTACCTGTGCTTGTACATGGAGAAGGAT
GAGATGCTGGGAGCCACCCTCATCCTGGCATGGGTCCCCAACTCTCGCATCCAGAGGCAGGACGAGGAGG
CCCTGCGCTACATCACACCCGAGAGCTCCCCCGTTCGCAAGGCACCCCGCCCTCGGGGCCGGCGCACCCG
GAGCTCAGGAGCCTCCCACCAGCCCTCCCCGACGGAGCTGCGGCCTACCCTGACCCCCAAAGATGAGGAC
ATCCTGGTGGTGGCCCAGAGTGTTCCAGACCGCATGCTCGCCAGCCCTGCGCCAGAGGATGAGGAGAAGC
TGGCGCAGGGCTTGGGGGTGGATGGTGCCCAGCCAGCCTCGCAGCCTGCTTGCAGCCCCTCCGGGATCTT
GTCGACGGTCAGTCCGCAGGATGTCACCGAGGAGGGGCGGGAGCCGCGGCCCGAGGCCGGGGAGGAGGAT
GGCTCTTTGGAACTGTCAGCCGAGGGCGTGAGCAGAGACAGCTCCTTTGACTCAGACTCAGACACCTTCT
CCTCGCCCTTCTGCCTCTCGCCCATCAGCGCGGCGCTGGCCGAGAGCCGCGGCTCCGTGTTTCTGGAAAG
TGACAGCAGCCCCCCGTCCAGCTCCGACGCCGGCCTGCGGTTCCCGGACAGCAACGGCCTCCTGCAGACC
CCACGCTGGGACGAGCCGCAGCGGGTGTGCGCCCTGGAGCAGATTTGCGGCGTGTTCCGCGTGGACCTGG
GCCACATGCGCTCCCTCCGCCTTTTCTTCAGCGACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAG
CCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAG
CAGTGGAAATACTGCACCGAGATGCAGCTCAAAGACCAGCAGGTCGCCCCCGATAAGACATGCATGCAGT
TCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCGG
CGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGGCCAGGTGGAGGAGGAGTACAAGCTGCGGAAGGCC
ATTTTCTTTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTCTGGCCCTTCCTGCTGCGCTATTACAGCC
ACGAGTCCACGTCGGAGGAGCGGGAGGCGCTGCGGCTGCAGAAGCGAAAGGAGTACTCTGAGATCCAGCA
GAAAAGGCTCTCCATGACTCCCGAGGAGCACAGAGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAAA
GACGTGGTCCGGACAGATCGGAACAACCAGTTCTTCCGGGGGGAAGACAATCCCAATGTGGAGAGCATGA
GGAGGATCCTGCTGAACTACGCCGTGTACAACCCTGCCGTCGGCTATTCCCAAGGGATGTCGGACCTGGT
GGCGCCCATCTTGGCCGAGGTCCTGGATGAGTCAGACACCTTCTGGTGCTTTGTGGGTTTGATGCAGAAC
ACGATCTTCGTCAGCTCACCCCGGGACGAGGACATGGAGAAACAACTGCTGTACCTGCGCGAGCTGCTGC
GGCTGACGCACGTGCGCTTCTACCAGCACCTGGTCTCGCTGGGCGAGGACGGCCTGCAGATGCTCTTCTG
CCACCGCTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCGAGGCCGAAGCGCTGCGGATCTGGGAGGCC
TGCTGGGCCCACTACCAGACGGACTACTTCCACCTTTTCATCTGCGTGGCCATCGTGGCCATCTACGGGG
ATGACGTCATCGAGCAGCAGCTGGCCACGGACCAGATGCTCCTGCACTTCGGAAACCTGGCCATGCACAT
GAACGGGGAGCTCGTTCTCCGGAAGGCGAGGAGTTTGCTGTACCAGTTCCGCCTCCTGCCCCGGATCCCC
TGCAGCCTGCACGATCTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCTCCATGCCCGCGGTGG
AGTGCACCGGCCACCATCCCGGCTCGGAGAGCTGTCCCTACGGGGGCACGGTGGAGATGCCTTCCCCCAA
GTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTTCCGCAGATAG

Translation (767 aa):
MSLGRLLRRASSKASDLLTLTPGGSGSGSPSVLDGEIIYSKNNVCVHPPEGLQGLGEHHPGYLCLYMEKD
EMLGATLILAWVPNSRIQRQDEEALRYITPESSPVRKAPRPRGRRTRSSGASHQPSPTELRPTLTPKDED
ILVVAQSVPDRMLASPAPEDEEKLAQGLGVDGAQPASQPACSPSGILSTVSPQDVTEEGREPRPEAGEED
GSLELSAEGVSRDSSFDSDSDTFSSPFCLSPISAALAESRGSVFLESDSSPPSSSDAGLRFPDSNGLLQT
PRWDEPQRVCALEQICGVFRVDLGHMRSLRLFFSDEACTSGQLVVASRESQYKVFHFHHGGLDKLSDVFQ
QWKYCTEMQLKDQQVAPDKTCMQFSIRRPKLPSSETHPEESMYKRLGVSAWLNHLNELGQVEEEYKLRKA
IFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALRLQKRKEYSEIQQKRLSMTPEEHRAFWRNVQFTVDK
DVVRTDRNNQFFRGEDNPNVESMRRILLNYAVYNPAVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQN
TIFVSSPRDEDMEKQLLYLRELLRLTHVRFYQHLVSLGEDGLQMLFCHRWLLLCFKREFPEAEALRIWEA
CWAHYQTDYFHLFICVAIVAIYGDDVIEQQLATDQMLLHFGNLAMHMNGELVLRKARSLLYQFRLLPRIP
CSLHDLCKLCGSGMWDSGSMPAVECTGHHPGSESCPYGGTVEMPSPKSLREGKKGPKTPQDGFGFRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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