NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11969.1 Public Homo sapiens 18 ZNF532 24 110 108 CCDS HistoryNCBI Gene:55205Re-query CCDS DB by CCDS ID:11969.1Re-query CCDS DB by GeneID:55205See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11969.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336078.8 ENSP00000338217.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336078.8Link to Ensembl Protein Viewer:ENSP00000338217.4Re-query CCDS DB by Nucleotide ID:ENST00000336078Re-query CCDS DB by Protein ID:ENSP00000338217
Original member Current member EBI ENST00000591230.5 ENSP00000465709.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591230.5Link to Ensembl Protein Viewer:ENSP00000465709.1Re-query CCDS DB by Nucleotide ID:ENST00000591230Re-query CCDS DB by Protein ID:ENSP00000465709
Original member Current member EBI ENST00000589288.5 ENSP00000466007.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589288.5Link to Ensembl Protein Viewer:ENSP00000466007.1Re-query CCDS DB by Nucleotide ID:ENST00000589288Re-query CCDS DB by Protein ID:ENSP00000466007
Original member Current member EBI ENST00000591808.6 ENSP00000468238.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000591808.6Link to Ensembl Protein Viewer:ENSP00000468238.1Re-query CCDS DB by Nucleotide ID:ENST00000591808Re-query CCDS DB by Protein ID:ENSP00000468238
Original member Current member EBI ENST00000591083.5 ENSP00000468532.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591083.5Link to Ensembl Protein Viewer:ENSP00000468532.1Re-query CCDS DB by Nucleotide ID:ENST00000591083Re-query CCDS DB by Protein ID:ENSP00000468532
Original member Current member NCBI NM_001318726.2 NP_001305655.1 Accepted alive Link to Nucleotide Sequence:NM_001318726.2Link to Protein Sequence:NP_001305655.1Re-query CCDS DB by Nucleotide ID:NM_001318726Re-query CCDS DB by Protein ID:NP_001305655Link to BLAST:NP_001305655.1
Original member Current member NCBI NM_001318727.2 NP_001305656.1 Accepted alive Link to Nucleotide Sequence:NM_001318727.2Link to Protein Sequence:NP_001305656.1Re-query CCDS DB by Nucleotide ID:NM_001318727Re-query CCDS DB by Protein ID:NP_001305656Link to BLAST:NP_001305656.1
Original member Current member NCBI NM_001318728.2 NP_001305657.1 Accepted alive Link to Nucleotide Sequence:NM_001318728.2Link to Protein Sequence:NP_001305657.1Re-query CCDS DB by Nucleotide ID:NM_001318728Re-query CCDS DB by Protein ID:NP_001305657Link to BLAST:NP_001305657.1
Original member Current member NCBI NM_001353525.2 NP_001340454.1 Accepted alive Link to Nucleotide Sequence:NM_001353525.2Link to Protein Sequence:NP_001340454.1Re-query CCDS DB by Nucleotide ID:NM_001353525Re-query CCDS DB by Protein ID:NP_001340454Link to BLAST:NP_001340454.1
Original member Current member NCBI NM_001353526.2 NP_001340455.1 Accepted alive Link to Nucleotide Sequence:NM_001353526.2Link to Protein Sequence:NP_001340455.1Re-query CCDS DB by Nucleotide ID:NM_001353526Re-query CCDS DB by Protein ID:NP_001340455Link to BLAST:NP_001340455.1
Original member Current member NCBI NM_001353527.2 NP_001340456.1 Accepted alive Link to Nucleotide Sequence:NM_001353527.2Link to Protein Sequence:NP_001340456.1Re-query CCDS DB by Nucleotide ID:NM_001353527Re-query CCDS DB by Protein ID:NP_001340456Link to BLAST:NP_001340456.1
Original member Current member NCBI NM_001353528.2 NP_001340457.1 Accepted alive Link to Nucleotide Sequence:NM_001353528.2Link to Protein Sequence:NP_001340457.1Re-query CCDS DB by Nucleotide ID:NM_001353528Re-query CCDS DB by Protein ID:NP_001340457Link to BLAST:NP_001340457.1
Original member Current member NCBI NM_001353529.2 NP_001340458.1 Accepted alive Link to Nucleotide Sequence:NM_001353529.2Link to Protein Sequence:NP_001340458.1Re-query CCDS DB by Nucleotide ID:NM_001353529Re-query CCDS DB by Protein ID:NP_001340458Link to BLAST:NP_001340458.1
Original member Current member NCBI NM_001375912.1 NP_001362841.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001375912.1Link to Protein Sequence:NP_001362841.1Re-query CCDS DB by Nucleotide ID:NM_001375912Re-query CCDS DB by Protein ID:NP_001362841Link to BLAST:NP_001362841.1
Original member Current member NCBI NM_018181.6 NP_060651.2 Accepted alive Link to Nucleotide Sequence:NM_018181.6Link to Protein Sequence:NP_060651.2Re-query CCDS DB by Nucleotide ID:NM_018181Re-query CCDS DB by Protein ID:NP_060651Link to BLAST:NP_060651.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305655.1 1301 Q9HCE3 1301 100% 0 0
NP_001305656.1 1301 Q9HCE3 1301 100% 0 0
NP_001305657.1 1301 Q9HCE3 1301 100% 0 0
NP_001340454.1 1301 Q9HCE3 1301 100% 0 0
NP_001340455.1 1301 Q9HCE3 1301 100% 0 0
NP_001340456.1 1301 Q9HCE3 1301 100% 0 0
NP_001340457.1 1301 Q9HCE3 1301 100% 0 0
NP_001340458.1 1301 Q9HCE3 1301 100% 0 0
NP_001362841.1 1301 Q9HCE3 1301 100% 0 0
NP_060651.2 1301 Q9HCE3 1301 100% 0 0

Chromosomal Locations for CCDS 11969.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 58918288 58920633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58934433 58934614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58939445 58939621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58948067 58948229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58953518 58953799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58979055 58979167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58981470 58981617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58983972 58984466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3906 nt):
ATGACCATGGGGGATATGAAGACCCCAGACTTTGATGACCTCCTGGCAGCATTTGACATCCCAGATATGG
TCGATCCTAAAGCAGCTATTGAGTCTGGACACGATGACCATGAAAGCCACATGAAGCAGAATGCTCACGG
AGAGGATGACTCCCACGCACCATCATCTTCTGATGTGGGTGTCAGCGTTATCGTCAAGAATGTTCGGAAC
ATTGACTCTTCCGAGGGCGGGGAGAAAGACGGCCACAACCCCACTGGCAATGGCTTACATAATGGGTTTC
TCACAGCATCCTCCCTTGACAGTTACAGTAAAGATGGAGCAAAGTCCTTGAAAGGAGATGTGCCTGCCTC
TGAGGTGACACTGAAAGACTCGACATTCAGCCAGTTTAGCCCGATCTCCAGTGCTGAAGAGTTTGATGAC
GACGAGAAGATTGAGGTGGATGACCCCCCTGACAAGGAGGACATGCGATCAAGCTTCAGGTCGAATGTGT
TGACGGGGTCGGCTCCCCAGCAGGACTACGATAAGCTGAAGGCACTCGGAGGGGAAAACTCCAGCAAAAC
TGGACTCTCTACGTCAGGCAATGTGGAGAAAAACAAAGCTGTTAAGAGAGAAACAGAAGCCAGTTCTATA
AACCTGAGTGTTTATGAACCTTTTAAAGTCAGAAAAGCAGAGGATAAATTGAAGGAAAGCTCTGACAAGG
TGCTGGAAAACAGAGTCCTAGATGGGAAGCTGAGCTCCGAGAAGAATGACACCAGCCTCCCCAGCGTTGC
GCCATCAAAGACAAAGTCGTCCTCCAAGCTCTCGTCCTGCATCGCTGCCATCGCGGCTCTCAGCGCTAAA
AAGGCGGCTTCAGACTCCTGCAAAGAACCAGTGGCCAATTCGAGGGAATCCTCCCCGTTACCAAAAGAAG
TAAATGACAGTCCGAGAGCCGCTGACAAGTCTCCTGAATCCCAGAATCTCATCGACGGGACCAAAAAACC
ATCCCTGAAGCAACCGGATAGTCCCAGAAGCATCTCAAGTGAGAACAGCAGCAAAGGATCCCCGTCCTCT
CCCGCAGGGTCCACACCAGCAATCCCCAAAGTCCGCATAAAAACCATTAAGACATCTTCTGGGGAAATCA
AGAGAACAGTGACCAGGGTATTGCCAGAAGTGGATCTTGACTCTGGAAAGAAACCTTCCGAGCAGACAGC
GTCCGTGATGGCCTCTGTGACATCCCTTCTGTCGTCTCCAGCATCAGCCGCCGTCCTTTCCTCTCCCCCC
AGGGCGCCTCTCCAGTCTGCGGTCGTGACCAATGCAGTTTCCCCTGCAGAGCTCACCCCCAAACAGGTCA
CAATCAAGCCTGTGGCTACTGCTTTCCTCCCAGTGTCTGCTGTGAAGACGGCAGGATCCCAAGTCATTAA
TTTGAAGCTCGCTAACAACACCACGGTGAAAGCCACGGTCATATCTGCTGCCTCTGTCCAGAGTGCCAGC
AGCGCCATCATTAAAGCTGCCAACGCCATCCAGCAGCAAACTGTCGTGGTGCCGGCATCCAGCCTGGCCA
ATGCCAAACTCGTGCCAAAGACTGTGCACCTTGCCAACCTTAACCTTTTGCCTCAGGGTGCCCAGGCCAC
CTCTGAACTCCGCCAAGTGCTAACCAAACCTCAGCAACAAATAAAGCAGGCAATAATCAATGCAGCAGCC
TCGCAACCCCCCAAAAAGGTGTCTCGAGTCCAGGTGGTGTCGTCCTTGCAGAGTTCTGTGGTGGAAGCTT
TCAACAAGGTGCTGAGCAGTGTCAATCCAGTCCCTGTTTACATCCCAAACCTCAGTCCTCCCGCCAATGC
AGGGATCACGTTACCGACGCGTGGGTACAAGTGCTTGGAGTGTGGGGACTCCTTTGCACTTGAAAAGAGT
CTGACCCAGCACTACGACAGACGGAGCGTGCGCATCGAAGTAACGTGCAACCATTGTACAAAGAACCTCG
TTTTTTACAACAAATGCAGCCTCCTTTCCCATGCCCGTGGGCATAAGGAGAAAGGGGTGGTAATGCAATG
CTCCCACTTAATTTTAAAGCCAGTCCCAGCAGATCAAATGATAGTTTCTCCGTCAAGCAATACTTCCACT
TCAACTTCCACTCTTCAGAGCCCTGTGGGAGCTGGCACACACACTGTCACAAAAATTCAGTCTGGCATAA
CTGGGACAGTCATATCGGCTCCTTCAAGCACTCCCATCACCCCAGCCATGCCCCTAGATGAAGACCCCTC
CAAACTGTGTAGACATAGTCTAAAATGTTTGGAGTGTAATGAAGTCTTCCAGGACGAGACATCACTGGCT
ACACATTTCCAGCAGGCTGCAGATACGAGTGGACAAAAGACTTGCACTATCTGCCAGATGCTGCTTCCTA
ACCAGTGCAGTTATGCATCACACCAGAGAATCCATCAGCACAAATCTCCCTACACCTGCCCTGAGTGTGG
GGCCATCTGCAGGTCGGTGCACTTCCAGACCCACGTCACCAAGAACTGTCTGCACTACACGAGGAGAGTT
GGTTTTCGATGTGTGCATTGCAATGTTGTGTACTCTGATGTGGCTGCTCTGAAGTCTCACATTCAAGGTT
CTCACTGTGAAGTCTTCTACAAGTGTCCTATTTGTCCAATGGCGTTTAAGTCTGCCCCAAGCACACATTC
CCACGCCTACACACAGCATCCTGGCATCAAGATAGGAGAACCAAAAATAATATATAAGTGTTCCATGTGC
GACACTGTGTTCACCCTGCAAACCTTGCTGTATCGCCACTTTGACCAACACATTGAAAACCAGAAGGTGT
CTGTTTTCAAGTGTCCAGACTGTTCTCTTTTATATGCACAGAAGCAACTTATGATGGACCATATCAAGTC
TATGCATGGAACATTGAAAAGTATTGAAGGGCCTCCAAACTTGGGTATAAACTTGCCTTTGAGCATTAAG
CCTGCAACTCAAAATTCAGCAAATCAGAACAAAGAGGACACCAAATCCATGAATGGGAAAGAGAAATTGG
AAAAGAAATCTCCATCTCCTGTGAAAAAATCAATGGAAACCAAGAAAGTGGCCAGTCCTGGGTGGACGTG
TTGGGAGTGTGACTGCCTGTTCATGCAGAGAGATGTGTACATATCCCACGTGAGGAAGGAGCACGGGAAG
CAAATGAAGAAACACCCCTGCCGCCAGTGTGACAAGTCTTTCAGCTCGTCCCACAGCCTGTGCCGGCACA
ACCGGATCAAGCACAAAGGCATCAGGAAAGTGTACGCCTGCTCGCACTGCCCAGACTCCAGACGTACCTT
TACCAAACGTTTGATGCTGGAGAAGCACGTCCAGCTGATGCATGGCATCAAGGACCCTGACCTGAAAGAA
ATGACAGATGCCACCAATGAGGAGGAAACAGAAATAAAAGAAGACACTAAGGTCCCCAGTCCCAAGCGGA
AGTTGGAAGAACCAGTTCTGGAGTTCAGGCCTCCCCGAGGAGCAATCACTCAACCACTGAAAAAGCTGAA
AATCAATGTTTTTAAGGTTCACAAGTGTGCCGTGTGTGGCTTCACCACCGAAAACCTGCTGCAATTCCAC
GAACACATCCCTCAGCACAAATCGGATGGTTCTTCCTACCAGTGCCGGGAGTGTGGCCTCTGCTACACGT
CTCACGTCTCTCTGTCCAGGCACCTCTTCATCGTACACAAGTTAAAGGAACCTCAGCCAGTGTCCAAGCA
AAATGGGGCTGGGGAAGATAACCAACAGGAGAACAAACCCAGCCACGAGGATGAATCCCCTGATGGCGCC
GTGTCAGACAGAAAGTGCAAAGTGTGCGCAAAAACTTTTGAAACTGAAGCTGCCTTAAATACTCACATGC
GGACACACGGCATGGCCTTCATCAAATCCAAAAGGATGAGCTCAGCCGAGAAATAG

Translation (1301 aa):
MTMGDMKTPDFDDLLAAFDIPDMVDPKAAIESGHDDHESHMKQNAHGEDDSHAPSSSDVGVSVIVKNVRN
IDSSEGGEKDGHNPTGNGLHNGFLTASSLDSYSKDGAKSLKGDVPASEVTLKDSTFSQFSPISSAEEFDD
DEKIEVDDPPDKEDMRSSFRSNVLTGSAPQQDYDKLKALGGENSSKTGLSTSGNVEKNKAVKRETEASSI
NLSVYEPFKVRKAEDKLKESSDKVLENRVLDGKLSSEKNDTSLPSVAPSKTKSSSKLSSCIAAIAALSAK
KAASDSCKEPVANSRESSPLPKEVNDSPRAADKSPESQNLIDGTKKPSLKQPDSPRSISSENSSKGSPSS
PAGSTPAIPKVRIKTIKTSSGEIKRTVTRVLPEVDLDSGKKPSEQTASVMASVTSLLSSPASAAVLSSPP
RAPLQSAVVTNAVSPAELTPKQVTIKPVATAFLPVSAVKTAGSQVINLKLANNTTVKATVISAASVQSAS
SAIIKAANAIQQQTVVVPASSLANAKLVPKTVHLANLNLLPQGAQATSELRQVLTKPQQQIKQAIINAAA
SQPPKKVSRVQVVSSLQSSVVEAFNKVLSSVNPVPVYIPNLSPPANAGITLPTRGYKCLECGDSFALEKS
LTQHYDRRSVRIEVTCNHCTKNLVFYNKCSLLSHARGHKEKGVVMQCSHLILKPVPADQMIVSPSSNTST
STSTLQSPVGAGTHTVTKIQSGITGTVISAPSSTPITPAMPLDEDPSKLCRHSLKCLECNEVFQDETSLA
THFQQAADTSGQKTCTICQMLLPNQCSYASHQRIHQHKSPYTCPECGAICRSVHFQTHVTKNCLHYTRRV
GFRCVHCNVVYSDVAALKSHIQGSHCEVFYKCPICPMAFKSAPSTHSHAYTQHPGIKIGEPKIIYKCSMC
DTVFTLQTLLYRHFDQHIENQKVSVFKCPDCSLLYAQKQLMMDHIKSMHGTLKSIEGPPNLGINLPLSIK
PATQNSANQNKEDTKSMNGKEKLEKKSPSPVKKSMETKKVASPGWTCWECDCLFMQRDVYISHVRKEHGK
QMKKHPCRQCDKSFSSSHSLCRHNRIKHKGIRKVYACSHCPDSRRTFTKRLMLEKHVQLMHGIKDPDLKE
MTDATNEEETEIKEDTKVPSPKRKLEEPVLEFRPPRGAITQPLKKLKINVFKVHKCAVCGFTTENLLQFH
EHIPQHKSDGSSYQCRECGLCYTSHVSLSRHLFIVHKLKEPQPVSKQNGAGEDNQQENKPSHEDESPDGA
VSDRKCKVCAKTFETEAALNTHMRTHGMAFIKSKRMSSAEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH