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Report for CCDS1215.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
1215.1 |
Public |
Homo sapiens |
1 |
ARHGAP30 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:257106](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:1215.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:257106](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 1215.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000368016.7 |
ENSP00000356995.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000368016.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000356995.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000368016](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000356995](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_181720.3 |
NP_859071.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_181720.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_859071.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_181720](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_859071](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_859071.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_859071.2 |
890 |
Q7Z6I6-2 |
890 |
99.8876% |
0 |
1 |
Chromosomal Locations for CCDS 1215.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2673 nt): ATGAAGTCTCGGCAGAAAGGAAAGAAGAAGGGCAGCGCAAAGGAGCGGGTTTTTGGGTGCGACTTGCAGG AGCACCTGCAGCACTCAGGCCAGGAGGTGCCCCAGGTGCTAAAGAGCTGTGCAGAATTTGTGGAGGAGTA TGGAGTGGTGGATGGGATCTACCGCCTCTCAGGGGTCTCCTCCAACATCCAGAAGCTTCGGCAGGAATTT GAGTCAGAGCGGAAGCCAGACCTGCGTCGGGATGTTTACCTCCAAGACATTCACTGCGTCTCCTCCCTGT GCAAGGCCTATTTCAGAGAACTGCCGGATCCCCTGCTCACTTACCGGCTCTATGACAAGTTTGCTGAGGC TGTAGGAGTGCAATTGGAACCTGAGCGCTTGGTCAAGATCCTAGAGGTGCTTCGGGAACTCCCTGTCCCA AACTACAGGACCCTGGAGTTCCTCATGAGGCACTTGGTACACATGGCCTCATTCAGTGCCCAGACCAACA TGCATGCTCGCAACCTGGCCATCGTGTGGGCTCCCAACCTGCTGAGGTCTAAGGACATAGAGGCCTCAGG CTTCAATGGGACAGCGGCCTTCATGGAGGTGCGGGTACAATCCATCGTCGTGGAGTTCATCCTCACACAC GTGGACCAGCTCTTTGGGGGTGCTGCCCTCTCTGGTGGTGAGGTGGAGAGTGGGTGGCGATCGCTTCCAG GGACCCGGGCATCAGGCAGCCCCGAGGACCTTATGCCCAGGCCACTGCCTTATCACCTGCCTAGCATACT GCAGGCTGGCGATGGACCCCCACAGATGCGGCCCTACCATACTATCATCGAGATTGCAGAGCACAAGAGG AAGGGGTCTTTGAAGGTCAGGAAGTGGAGGTCTATCTTCAATTTAGGTCGCTCTGGCCATGAGACTAAGC GTAAACTTCCACGGGGGGCTGAGGACAGGGAGGATAAATCCAACAAGGGGACACTGCGGCCAGCCAAAAG CATGGACTCACTGAGTGCTGCAGCTGGGGCCAGTGATGAGCCAGAGGGGCTGGTGGGGCCCAGCAGCCCC CGGCCAAGCCCATTGCTGCCTGAGAGCTTGGAGAACGATTCTATAGAGGCAGCAGAGGGTGAACAGGAGC CTGAGGCAGAAGCACTGGGTGGCACAAACTCTGAACCAGGCACACCACGAGCTGGGCGGTCAGCCATCCG GGCTGGGGGCAGCAGCCGTGCAGAACGCTGTGCTGGTGTCCACATCTCAGACCCCTACAATGTCAACCTC CCGCTACACATCACCTCTATCCTCAGTGTGCCCCCGAACATCATCTCTAACGTTTCCTTGGCCAGGCTCA CCCGTGGCCTTGAGTGCCCTGCTCTACAGCACCGGCCAAGCCCTGCCTCTGGCCCTGGCCCTGGCCCTGG CCTTGGCCCTGGCCCCCCAGATGAAAAGTTGGAAGCAAGTCCAGCCTCAAGTCCCCTGGCAGACTCAGGC CCAGACGACTTGGCTCCTGCCCTGGAGGACTCGCTGTCCCAGGAGGTGCAGGACTCCTTCTCCTTCCTAG AGGACTCAAGCAGCTCAGAACCTGAGTGGGTGGGGGCAGAGGATGGGGAGGTGGCCCAGGCAGAAGCAGC AGGAGCAGCCTTCTCCCCTGGGGAGGACGACCCTGGGATGGGCTACCTGGAGGAGCTCCTGGGAGTTGGG CCTCAGGTGGAGGAGTTCTCTGTGGAGCCACCCCTGGATGACCTGTCTCTGGATGAGGCACAGTTTGTCT TGGCCCCCAGCTGCTGTTCCCTGGACTCCGCTGGCCCCAGGCCTGAAGTTGAGGAGGAAAATGGGGAGGA AGTTTTCCTGAGTGCCTATGATGACCTAAGTCCCCTTCTGGGACCTAAACCCCCAATCTGGAAGGGTTCA GGGAGTCTGGAGGGAGAGGCAGCAGGATGTGGAAGGCAGGCTCTGGGACAGGGTGGGGAAGAGCAGGCAT GCTGGGAAGTTGGGGAGGACAAGCAGGCTGAGCCTGGAGGCAGGCTAGACATCAGGGAAGAGGCAGAGGG AACCCCACAGCCACCTCAGCCAGAGGAGATGGAGCCTGAGGGGCAGCCCAGTCCAGACGGCTGTCTATGC CCCTGTTCTCTTGGCCTGGGTGGCGTGGGCATGCGTCTAGCTTCCACTCTGGTTCAGGTCCAACAGGTCC GCTCTGTGCCTGTGGTGCCCCCCAAGCCACAGTTTGCCAAGATGCCCAGTGCAATGTGTAGCAAGATTCA TGTGGCACCTGCAAATCCATGCCCGAGGCCTGGCCGGCTTGATGGGACTCCTGGAGAAAGGGCTTGGGGG TCCCGAGCTTCTCGATCCTCTTGGAGGAATGGGGGTAGTCTTTCCTTTGATGCTGCTGTGGCCCTAGCCC GGGACCGCCAAAGGACTGAGGCTCAAGGAGTTCGGCGAACCCAGACCTGTACTGAGGGTGGGGATTACTG CCTCATCCCCAGAACCTCCCCTTGTAGCATGATCTCTGCCCATTCTCCTCGGCCCCTTAGCTGCCTGGAG CTCCCATCTGAAGGTGCAGAAGGGTCTGGATCCCGGAGTCGTCTTAGTCTGCCCCCCAGAGAACCCCAGG TTCCTGACCCCCTGTTGTCCTCTCAGCGCAGGTCATATGCATTTGAAACACAGGCTAACCCTGGGAAAGG TGAAGGACTGTGA
Translation (890 aa): MKSRQKGKKKGSAKERVFGCDLQEHLQHSGQEVPQVLKSCAEFVEEYGVVDGIYRLSGVSSNIQKLRQEF ESERKPDLRRDVYLQDIHCVSSLCKAYFRELPDPLLTYRLYDKFAEAVGVQLEPERLVKILEVLRELPVP NYRTLEFLMRHLVHMASFSAQTNMHARNLAIVWAPNLLRSKDIEASGFNGTAAFMEVRVQSIVVEFILTH VDQLFGGAALSGGEVESGWRSLPGTRASGSPEDLMPRPLPYHLPSILQAGDGPPQMRPYHTIIEIAEHKR KGSLKVRKWRSIFNLGRSGHETKRKLPRGAEDREDKSNKGTLRPAKSMDSLSAAAGASDEPEGLVGPSSP RPSPLLPESLENDSIEAAEGEQEPEAEALGGTNSEPGTPRAGRSAIRAGGSSRAERCAGVHISDPYNVNL PLHITSILSVPPNIISNVSLARLTRGLECPALQHRPSPASGPGPGPGLGPGPPDEKLEASPASSPLADSG PDDLAPALEDSLSQEVQDSFSFLEDSSSSEPEWVGAEDGEVAQAEAAGAAFSPGEDDPGMGYLEELLGVG PQVEEFSVEPPLDDLSLDEAQFVLAPSCCSLDSAGPRPEVEEENGEEVFLSAYDDLSPLLGPKPPIWKGS GSLEGEAAGCGRQALGQGGEEQACWEVGEDKQAEPGGRLDIREEAEGTPQPPQPEEMEPEGQPSPDGCLC PCSLGLGGVGMRLASTLVQVQQVRSVPVVPPKPQFAKMPSAMCSKIHVAPANPCPRPGRLDGTPGERAWG SRASRSSWRNGGSLSFDAAVALARDRQRTEAQGVRRTQTCTEGGDYCLIPRTSPCSMISAHSPRPLSCLE LPSEGAEGSGSRSRLSLPPREPQVPDPLLSSQRRSYAFETQANPGKGEGL
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