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Report for CCDS12219.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12219.1 Public Homo sapiens 19 UBL5 24 110 108 CCDS HistoryNCBI Gene:59286Re-query CCDS DB by CCDS ID:12219.1Re-query CCDS DB by GeneID:59286See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12219.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358666.7 ENSP00000351492.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358666.7Link to Ensembl Protein Viewer:ENSP00000351492.2Re-query CCDS DB by Nucleotide ID:ENST00000358666Re-query CCDS DB by Protein ID:ENSP00000351492
Original member Current member EBI ENST00000590068.1 ENSP00000466910.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590068.1Link to Ensembl Protein Viewer:ENSP00000466910.1Re-query CCDS DB by Nucleotide ID:ENST00000590068Re-query CCDS DB by Protein ID:ENSP00000466910
Original member Current member EBI ENST00000586895.6 ENSP00000468656.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000586895.6Link to Ensembl Protein Viewer:ENSP00000468656.1Re-query CCDS DB by Nucleotide ID:ENST00000586895Re-query CCDS DB by Protein ID:ENSP00000468656
Original member Current member NCBI NM_001048241.3 NP_001041706.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001048241.3Link to Protein Sequence:NP_001041706.1Re-query CCDS DB by Nucleotide ID:NM_001048241Re-query CCDS DB by Protein ID:NP_001041706Link to BLAST:NP_001041706.1
Original member Current member NCBI NM_024292.4 NP_077268.1 Accepted alive Link to Nucleotide Sequence:NM_024292.4Link to Protein Sequence:NP_077268.1Re-query CCDS DB by Nucleotide ID:NM_024292Re-query CCDS DB by Protein ID:NP_077268Link to BLAST:NP_077268.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001041706.1 73 Q9BZL1 73 100% 0 0
NP_077268.1 73 Q9BZL1 73 100% 0 0

Chromosomal Locations for CCDS 12219.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 9828338 9828393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9828592 9828675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9828837 9828874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9829965 9830008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (222 nt):
ATGATCGAGGTTGTTTGCAACGACCGTCTGGGGAAGAAGGTCCGCGTTAAATGCAACACGGATGATACCA
TCGGGGACCTTAAGAAGCTGATTGCAGCCCAAACTGGTACCCGTTGGAACAAGATTGTCCTGAAGAAGTG
GTACACGATTTTTAAGGACCACGTGTCTCTGGGGGACTATGAAATCCACGATGGGATGAACCTGGAGCTT
TATTATCAATAG

Translation (73 aa):
MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLEL
YYQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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