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Report for CCDS12224.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12224.1 Public Homo sapiens 19 ANGPTL6 24 110 108 CCDS HistoryNCBI Gene:83854Re-query CCDS DB by CCDS ID:12224.1Re-query CCDS DB by GeneID:83854See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12224.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253109.5 ENSP00000253109.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253109.5Link to Ensembl Protein Viewer:ENSP00000253109.3Re-query CCDS DB by Nucleotide ID:ENST00000253109Re-query CCDS DB by Protein ID:ENSP00000253109
Original member Current member EBI ENST00000592641.5 ENSP00000467930.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000592641.5Link to Ensembl Protein Viewer:ENSP00000467930.1Re-query CCDS DB by Nucleotide ID:ENST00000592641Re-query CCDS DB by Protein ID:ENSP00000467930
Original member Current member NCBI NM_001321411.2 NP_001308340.1 Accepted alive Link to Nucleotide Sequence:NM_001321411.2Link to Protein Sequence:NP_001308340.1Re-query CCDS DB by Nucleotide ID:NM_001321411Re-query CCDS DB by Protein ID:NP_001308340Link to BLAST:NP_001308340.1
Original member Current member NCBI NM_001387347.1 NP_001374276.1 Accepted alive Link to Nucleotide Sequence:NM_001387347.1Link to Protein Sequence:NP_001374276.1Re-query CCDS DB by Nucleotide ID:NM_001387347Re-query CCDS DB by Protein ID:NP_001374276Link to BLAST:NP_001374276.1
Original member Current member NCBI NM_001387348.1 NP_001374277.1 Accepted alive Link to Nucleotide Sequence:NM_001387348.1Link to Protein Sequence:NP_001374277.1Re-query CCDS DB by Nucleotide ID:NM_001387348Re-query CCDS DB by Protein ID:NP_001374277Link to BLAST:NP_001374277.1
Original member Current member NCBI NM_031917.3 NP_114123.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031917.3Link to Protein Sequence:NP_114123.2Re-query CCDS DB by Nucleotide ID:NM_031917Re-query CCDS DB by Protein ID:NP_114123Link to BLAST:NP_114123.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308340.1 470 Q8NI99 470 100% 0 0
NP_001374276.1 470 Q8NI99 470 100% 0 0
NP_001374277.1 470 Q8NI99 470 100% 0 0
NP_114123.2 470 Q8NI99 470 100% 0 0

Chromosomal Locations for CCDS 12224.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 10092589 10092779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10093349 10093619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10093693 10093880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10094758 10094938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10095982 10096563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1413 nt):
ATGGGGAAGCCCTGGCTGCGTGCGCTACAGCTGCTGCTCCTGCTGGGCGCGTCGTGGGCGCGGGCGGGCG
CCCCGCGCTGCACCTACACCTTCGTGCTGCCCCCGCAGAAGTTCACGGGCGCTGTGTGCTGGAGCGGCCC
CGCATCCACGCGGGCGACGCCCGAGGCCGCCAACGCCAGCGAGCTGGCGGCGCTGCGCATGCGCGTCGGC
CGCCACGAGGAGCTGTTACGCGAGCTGCAGAGGCTGGCGGCGGCCGACGGCGCCGTGGCCGGCGAGGTGC
GCGCGCTGCGCAAGGAGAGCCGCGGCCTGAGCGCGCGCCTGGGCCAGTTGCGCGCGCAGCTGCAGCACGA
GGCGGGGCCCGGGGCGGGCCCGGGGGCGGATCTGGGGGCGGAGCCTGCCGCGGCGCTGGCGCTGCTCGGG
GAGCGCGTGCTCAACGCGTCCGCCGAGGCTCAGCGCGCAGCCGCCCGGTTCCACCAGCTGGACGTCAAGT
TCCGCGAGCTGGCGCAGCTCGTCACCCAGCAGAGCAGTCTCATCGCCCGCCTGGAGCGCCTGTGCCCGGG
AGGCGCGGGCGGGCAGCAGCAGGTCCTGCCGCCACCCCCACTGGTGCCTGTGGTTCCGGTCCGTCTTGTG
GGTAGCACCAGTGACACCAGTAGGATGCTGGACCCAGCCCCAGAGCCCCAGAGAGACCAGACCCAGAGAC
AGCAGGAGCCCATGGCTTCTCCCATGCCTGCAGGTCACCCTGCGGTCCCCACCAAGCCTGTGGGCCCGTG
GCAGGATTGTGCAGAGGCCCGCCAGGCAGGCCATGAACAGAGTGGAGTGTATGAACTGCGAGTGGGCCGT
CACGTAGTGTCAGTATGGTGTGAGCAGCAACTGGAGGGTGGAGGCTGGACTGTGATCCAGCGGAGGCAAG
ATGGTTCAGTCAACTTCTTCACTACCTGGCAGCACTATAAGGCGGGCTTTGGGCGGCCAGACGGAGAATA
CTGGCTGGGCCTTGAACCCGTGTATCAGCTGACCAGCCGTGGGGACCATGAGCTGCTGGTTCTCCTGGAG
GACTGGGGGGGCCGTGGAGCACGTGCCCACTATGATGGCTTCTCCCTGGAACCCGAGAGCGACCACTACC
GCCTGCGGCTTGGCCAGTACCATGGTGATGCTGGAGACTCTCTTTCCTGGCACAATGACAAGCCCTTCAG
CACCGTGGATAGGGACCGAGACTCCTATTCTGGTAACTGTGCCCTGTACCAGCGGGGAGGCTGGTGGTAC
CATGCCTGTGCCCACTCCAACCTCAACGGTGTGTGGCACCACGGCGGCCACTACCGAAGCCGCTACCAGG
ATGGTGTCTACTGGGCTGAGTTTCGTGGTGGGGCATATTCTCTCAGGAAGGCCGCCATGCTCATTCGGCC
CCTGAAGCTGTGA

Translation (470 aa):
MGKPWLRALQLLLLLGASWARAGAPRCTYTFVLPPQKFTGAVCWSGPASTRATPEAANASELAALRMRVG
RHEELLRELQRLAAADGAVAGEVRALRKESRGLSARLGQLRAQLQHEAGPGAGPGADLGAEPAAALALLG
ERVLNASAEAQRAAARFHQLDVKFRELAQLVTQQSSLIARLERLCPGGAGGQQQVLPPPPLVPVVPVRLV
GSTSDTSRMLDPAPEPQRDQTQRQQEPMASPMPAGHPAVPTKPVGPWQDCAEARQAGHEQSGVYELRVGR
HVVSVWCEQQLEGGGWTVIQRRQDGSVNFFTTWQHYKAGFGRPDGEYWLGLEPVYQLTSRGDHELLVLLE
DWGGRGARAHYDGFSLEPESDHYRLRLGQYHGDAGDSLSWHNDKPFSTVDRDRDSYSGNCALYQRGGWWY
HACAHSNLNGVWHHGGHYRSRYQDGVYWAEFRGGAYSLRKAAMLIRPLKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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