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Report for CCDS12303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12303.1 Public Homo sapiens 19 IL27RA 24 110 108 CCDS HistoryNCBI Gene:9466Re-query CCDS DB by CCDS ID:12303.1Re-query CCDS DB by GeneID:9466See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12303.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263379.4 ENSP00000263379.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263379.4Link to Ensembl Protein Viewer:ENSP00000263379.1Re-query CCDS DB by Nucleotide ID:ENST00000263379Re-query CCDS DB by Protein ID:ENSP00000263379
Original member Current member NCBI NM_004843.4 NP_004834.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004843.4Link to Protein Sequence:NP_004834.1Re-query CCDS DB by Nucleotide ID:NM_004843Re-query CCDS DB by Protein ID:NP_004834Link to BLAST:NP_004834.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004834.1 636 Q6UWB1 636 100% 0 0

Chromosomal Locations for CCDS 12303.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 14031873 14031972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14032386 14032503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14039508 14039665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14039753 14039910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14042453 14042612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14042716 14042789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14046154 14046337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14046430 14046618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14048981 14049082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14049156 14049314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14050758 14050883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14051607 14051700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14051880 14051973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14052096 14052290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1911 nt):
ATGCGGGGAGGCAGGGGCGCCCCTTTCTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTGCCTCTGTTGT
GGGTGCTTTTCCAGCGGACGCGTCCCCAGGGCAGCGCCGGGCCACTGCAGTGCTACGGAGTTGGACCCTT
GGGCGACTTGAACTGCTCGTGGGAGCCTCTTGGGGACCTGGGAGCCCCCTCCGAGTTACACCTCCAGAGC
CAAAAGTACCGTTCCAACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGGAGCTGGGTGGCCATTCCTC
GGGAACAGCTCACCATGTCTGACAAACTCCTTGTCTGGGGCACTAAGGCAGGCCAGCCTCTCTGGCCCCC
CGTCTTCGTGAACCTAGAAACCCAAATGAAGCCAAACGCCCCCCGGCTGGGCCCTGACGTGGACTTTTCC
GAGGATGACCCCCTGGAGGCCACTGTCCATTGGGCCCCACCTACATGGCCATCTCATAAAGTTCTGATCT
GCCAGTTCCACTACCGAAGATGTCAGGAGGCGGCCTGGACCCTGCTGGAACCGGAGCTGAAGACCATACC
CCTGACCCCTGTTGAGATCCAAGATTTGGAGCTAGCCACTGGCTACAAAGTGTATGGCCGCTGCCGGATG
GAGAAAGAAGAGGATTTGTGGGGCGAGTGGAGCCCCATTTTGTCCTTCCAGACACCGCCTTCTGCTCCAA
AAGATGTGTGGGTATCAGGGAACCTCTGTGGGACGCCTGGAGGAGAGGAACCTTTGCTTCTATGGAAGGC
CCCAGGGCCCTGTGTGCAGGTGAGCTACAAAGTCTGGTTCTGGGTTGGAGGTCGTGAGCTGAGTCCAGAA
GGAATTACCTGCTGCTGCTCCCTAATTCCCAGTGGGGCGGAGTGGGCCAGGGTGTCCGCTGTCAACGCCA
CAAGCTGGGAGCCTCTCACCAACCTCTCTTTGGTCTGCTTGGATTCAGCCTCTGCCCCCCGTAGCGTGGC
AGTCAGCAGCATCGCTGGGAGCACGGAGCTACTGGTGACCTGGCAACCGGGGCCTGGGGAACCACTGGAG
CATGTAGTGGACTGGGCTCGAGATGGGGACCCCCTGGAGAAACTCAACTGGGTCCGGCTTCCCCCTGGGA
ACCTCAGTGCTCTGTTACCAGGGAATTTCACTGTCGGGGTCCCCTATCGAATCACTGTGACCGCAGTCTC
TGCTTCAGGCTTGGCCTCTGCATCCTCCGTCTGGGGGTTCAGGGAGGAATTAGCACCCCTAGTGGGGCCA
ACGCTTTGGCGACTCCAAGATGCCCCTCCAGGGACCCCCGCCATAGCGTGGGGAGAGGTCCCAAGGCACC
AGCTTCGAGGCCACCTCACCCACTACACCTTGTGTGCACAGAGTGGAACCAGCCCCTCCGTCTGCATGAA
TGTGAGTGGCAACACACAGAGTGTCACCCTGCCTGACCTTCCTTGGGGTCCCTGTGAGCTGTGGGTGACA
GCATCTACCATCGCTGGACAGGGCCCTCCTGGTCCCATCCTCCGGCTTCATCTACCAGATAACACCCTGA
GGTGGAAAGTTCTGCCGGGCATCCTATTCTTGTGGGGCTTGTTCCTGTTGGGGTGTGGCCTGAGCCTGGC
CACCTCTGGAAGGTGCTACCACCTAAGGCACAAAGTGCTGCCCCGCTGGGTCTGGGAGAAAGTTCCTGAT
CCTGCCAACAGCAGTTCAGGCCAGCCCCACATGGAGCAAGTACCTGAGGCCCAGCCCCTTGGGGACTTGC
CCATCCTGGAAGTGGAGGAGATGGAGCCCCCGCCGGTTATGGAGTCCTCCCAGCCCGCCCAGGCCACCGC
CCCGCTTGACTCTGGGTATGAGAAGCACTTCCTGCCCACACCTGAGGAGCTGGGCCTTCTGGGGCCCCCC
AGGCCACAGGTTCTGGCCTGA

Translation (636 aa):
MRGGRGAPFWLWPLPKLALLPLLWVLFQRTRPQGSAGPLQCYGVGPLGDLNCSWEPLGDLGAPSELHLQS
QKYRSNKTQTVAVAAGRSWVAIPREQLTMSDKLLVWGTKAGQPLWPPVFVNLETQMKPNAPRLGPDVDFS
EDDPLEATVHWAPPTWPSHKVLICQFHYRRCQEAAWTLLEPELKTIPLTPVEIQDLELATGYKVYGRCRM
EKEEDLWGEWSPILSFQTPPSAPKDVWVSGNLCGTPGGEEPLLLWKAPGPCVQVSYKVWFWVGGRELSPE
GITCCCSLIPSGAEWARVSAVNATSWEPLTNLSLVCLDSASAPRSVAVSSIAGSTELLVTWQPGPGEPLE
HVVDWARDGDPLEKLNWVRLPPGNLSALLPGNFTVGVPYRITVTAVSASGLASASSVWGFREELAPLVGP
TLWRLQDAPPGTPAIAWGEVPRHQLRGHLTHYTLCAQSGTSPSVCMNVSGNTQSVTLPDLPWGPCELWVT
ASTIAGQGPPGPILRLHLPDNTLRWKVLPGILFLWGLFLLGCGLSLATSGRCYHLRHKVLPRWVWEKVPD
PANSSSGQPHMEQVPEAQPLGDLPILEVEEMEPPPVMESSQPAQATAPLDSGYEKHFLPTPEELGLLGPP
RPQVLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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