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Report for CCDS12315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12315.1 Public Homo sapiens 19 ADGRE3 24 110 108 CCDS HistoryNCBI Gene:84658Re-query CCDS DB by CCDS ID:12315.1Re-query CCDS DB by GeneID:84658See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12315.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253673.6 ENSP00000253673.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253673.6Link to Ensembl Protein Viewer:ENSP00000253673.4Re-query CCDS DB by Nucleotide ID:ENST00000253673Re-query CCDS DB by Protein ID:ENSP00000253673
Original member Current member NCBI NM_032571.5 NP_115960.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032571.5Link to Protein Sequence:NP_115960.2Re-query CCDS DB by Nucleotide ID:NM_032571Re-query CCDS DB by Protein ID:NP_115960Link to BLAST:NP_115960.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115960.2 652 Q9BY15-1 652 100% 0 0

Chromosomal Locations for CCDS 12315.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 14619433 14619471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14625492 14625599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14630039 14630207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14632921 14633012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14633236 14633302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14638105 14638340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14641419 14641616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14644108 14644275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14647181 14647365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14651085 14651204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14654982 14655165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14658513 14658550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14661963 14662118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14663418 14663540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14668802 14668852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14674746 14674770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1959 nt):
ATGCAGGGACCATTGCTTCTTCCAGGCCTCTGCTTTCTGCTGAGCCTCTTTGGAGCTGTGACTCAGAAAA
CCAAAACTTCCTGTGCTAAGTGCCCCCCAAATGCTTCCTGTGTCAATAACACTCACTGCACCTGCAACCA
TGGATATACTTCTGGATCTGGGCAGAAACTATTCACATTCCCCTTGGAGACATGTAACGACATTAATGAA
TGTACACCACCCTATAGTGTATATTGTGGATTTAACGCTGTGTGTTACAATGTCGAAGGAAGTTTCTACT
GTCAATGTGTCCCAGGATATAGACTGCATTCTGGGAATGAACAATTCAGTAATTCCAATGAGAACACCTG
TCAGGACACCACCTCCTCAAAGACAACCGAGGGCAGGAAAGAGCTGCAAAAGATTGTGGACAAATTTGAG
TCACTTCTCACCAATCAGACTTTATGGAGAACAGAAGGGAGACAAGAAATCTCATCCACAGCTACCACTA
TTCTCCGGGATGTGGAATCGAAAGTTCTAGAAACTGCCTTGAAAGATCCAGAACAAAAAGTCCTGAAAAT
CCAAAACGATAGTGTAGCTATTGAAACTCAAGCGATTACAGACAATTGCTCTGAAGAAAGAAAGACATTC
AACTTGAACGTCCAAATGAACTCAATGGACATCCGTTGCAGTGACATCATCCAGGGAGACACACAAGGTC
CCAGTGCCATTGCCTTTATCTCATATTCTTCTCTTGGAAACATCATAAATGCAACTTTTTTTGAAGAGAT
GGATAAGAAAGATCAAGTGTATCTGAACTCTCAGGTTGTGAGTGCTGCTATTGGACCCAAAAGGAACGTG
TCTCTCTCCAAGTCTGTGACGCTGACTTTCCAGCACGTGAAGATGACCCCCAGTACCAAAAAGGTCTTCT
GTGTCTACTGGAAGAGCACAGGGCAGGGCAGCCAGTGGTCCAGGGATGGCTGCTTCCTGATACACGTGAA
CAAGAGTCACACCATGTGTAATTGCAGTCACCTGTCCAGCTTCGCTGTCCTGATGGCCCTGACCAGCCAG
GAGGAGGATCCCGTGCTGACTGTCATCACCTACGTGGGGCTGAGCGTCTCTCTGCTGTGCCTCCTCCTGG
CGGCCCTCACTTTTCTCCTGTGTAAAGCCATCCGGAACACCAGCACCTCACTGCATCTGCAGCTCTCGCT
CTGCCTCTTCCTGGCCCACCTCCTCTTCCTCGTGGGGATTGATCGAACTGAACCCAAGGTGCTGTGCTCC
ATCATCGCCGGTGCTTTGCACTATCTCTACCTGGCCGCCTTCACCTGGATGCTGCTGGAGGGTGTGCACC
TCTTCCTCACTGCACGGAACCTGACAGTGGTCAACTACTCAAGCATCAATAGACTCATGAAGTGGATCAT
GTTCCCAGTCGGCTATGGCGTTCCCGCTGTGACTGTGGCCATTTCTGCAGCCTCCTGGCCTCACCTTTAT
GGAACTGCTGATCGATGCTGGCTCCACCTGGACCAGGGATTCATGTGGAGTTTCCTTGGCCCAGTCTGTG
CCATTTTCTCTGCGAATTTAGTATTGTTTATCTTGGTCTTTTGGATTTTGAAAAGAAAACTTTCCTCCCT
CAATAGTGAAGTGTCAACCATCCAGAACACAAGGATGCTGGCTTTCAAAGCAACAGCTCAGCTCTTCATC
CTGGGCTGCACATGGTGTCTGGGCTTGCTACAGGTGGGTCCAGCTGCCCAGGTCATGGCCTACCTCTTCA
CCATCATCAACAGCCTCCAAGGCTTCTTCATCTTCTTGGTCTACTGCCTCCTCAGCCAGCAGGTCCAGAA
ACAATATCAAAAGTGGTTTAGAGAGATCGTAAAATCAAAATCTGAGTCTGAGACATACACACTTTCCAGC
AAGATGGGTCCTGACTCAAAACCCAGTGAGGGGGATGTTTTTCCAGGACAAGTGAAGAGAAAATATTAA

Translation (652 aa):
MQGPLLLPGLCFLLSLFGAVTQKTKTSCAKCPPNASCVNNTHCTCNHGYTSGSGQKLFTFPLETCNDINE
CTPPYSVYCGFNAVCYNVEGSFYCQCVPGYRLHSGNEQFSNSNENTCQDTTSSKTTEGRKELQKIVDKFE
SLLTNQTLWRTEGRQEISSTATTILRDVESKVLETALKDPEQKVLKIQNDSVAIETQAITDNCSEERKTF
NLNVQMNSMDIRCSDIIQGDTQGPSAIAFISYSSLGNIINATFFEEMDKKDQVYLNSQVVSAAIGPKRNV
SLSKSVTLTFQHVKMTPSTKKVFCVYWKSTGQGSQWSRDGCFLIHVNKSHTMCNCSHLSSFAVLMALTSQ
EEDPVLTVITYVGLSVSLLCLLLAALTFLLCKAIRNTSTSLHLQLSLCLFLAHLLFLVGIDRTEPKVLCS
IIAGALHYLYLAAFTWMLLEGVHLFLTARNLTVVNYSSINRLMKWIMFPVGYGVPAVTVAISAASWPHLY
GTADRCWLHLDQGFMWSFLGPVCAIFSANLVLFILVFWILKRKLSSLNSEVSTIQNTRMLAFKATAQLFI
LGCTWCLGLLQVGPAAQVMAYLFTIINSLQGFFIFLVYCLLSQQVQKQYQKWFREIVKSKSESETYTLSS
KMGPDSKPSEGDVFPGQVKRKY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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