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Report for CCDS12403.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12403.1 Public Homo sapiens 19 TSSK6 24 110 108 CCDS HistoryNCBI Gene:83983Re-query CCDS DB by CCDS ID:12403.1Re-query CCDS DB by GeneID:83983See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12403.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587522.3 ENSP00000466056.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587522.3Link to Ensembl Protein Viewer:ENSP00000466056.1Re-query CCDS DB by Nucleotide ID:ENST00000587522Re-query CCDS DB by Protein ID:ENSP00000466056
Original member Current member EBI ENST00000585580.4 ENSP00000466477.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000585580.4Link to Ensembl Protein Viewer:ENSP00000466477.1Re-query CCDS DB by Nucleotide ID:ENST00000585580Re-query CCDS DB by Protein ID:ENSP00000466477
Original member Current member NCBI NM_032037.4 NP_114426.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032037.4Link to Protein Sequence:NP_114426.1Re-query CCDS DB by Nucleotide ID:NM_032037Re-query CCDS DB by Protein ID:NP_114426Link to BLAST:NP_114426.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114426.1 273 Q9BXA6 273 100% 0 0

Chromosomal Locations for CCDS 12403.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 19514606 19515427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGTCGGGAGACAAACTTCTGAGCGAACTCGGTTATAAGCTGGGCCGCACAATTGGAGAGGGCAGCTACT
CCAAGGTGAAGGTGGCCACATCCAAGAAGTACAAGGGTACCGTGGCCATCAAGGTGGTGGACCGGCGGCG
AGCGCCCCCGGACTTCGTCAACAAGTTCCTGCCGCGAGAGCTGTCCATCCTGCGGGGCGTGCGACACCCG
CACATCGTGCACGTCTTCGAGTTCATCGAGGTGTGCAACGGGAAACTGTACATCGTGATGGAAGCGGCCG
CCACCGACCTGCTGCAAGCCGTGCAGCGCAACGGGCGCATCCCCGGAGTTCAGGCGCGCGACCTCTTTGC
GCAGATCGCCGGCGCCGTGCGCTACCTGCACGATCATCACCTGGTGCACCGCGACCTCAAGTGCGAAAAC
GTGCTGCTGAGCCCGGACGAGCGCCGCGTCAAGCTCACCGACTTCGGCTTCGGCCGCCAGGCCCATGGCT
ACCCAGACCTGAGCACCACCTACTGCGGCTCAGCCGCCTACGCGTCACCCGAGGTGCTCCTGGGCATCCC
CTACGACCCCAAGAAGTACGATGTGTGGAGCATGGGCGTCGTGCTCTACGTCATGGTCACCGGGTGCATG
CCCTTCGACGACTCGGACATCGCCGGCCTGCCCCGGCGCCAGAAACGCGGCGTGCTCTATCCCGAAGGCC
TCGAGCTGTCCGAGCGCTGCAAGGCCCTGATCGCCGAGCTGCTGCAGTTCAGCCCGTCCGCCAGGCCCTC
CGCGGGCCAGGTAGCGCGCAACTGCTGGCTGCGCGCCGGGGACTCCGGCTAG

Translation (273 aa):
MSGDKLLSELGYKLGRTIGEGSYSKVKVATSKKYKGTVAIKVVDRRRAPPDFVNKFLPRELSILRGVRHP
HIVHVFEFIEVCNGKLYIVMEAAATDLLQAVQRNGRIPGVQARDLFAQIAGAVRYLHDHHLVHRDLKCEN
VLLSPDERRVKLTDFGFGRQAHGYPDLSTTYCGSAAYASPEVLLGIPYDPKKYDVWSMGVVLYVMVTGCM
PFDDSDIAGLPRRQKRGVLYPEGLELSERCKALIAELLQFSPSARPSAGQVARNCWLRAGDSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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