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Report for CCDS12409.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12409.1 Public Homo sapiens 19 ZNF14 24 110 108 CCDS HistoryNCBI Gene:7561Re-query CCDS DB by CCDS ID:12409.1Re-query CCDS DB by GeneID:7561See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12409.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344099.4 ENSP00000340514.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000344099.4Link to Ensembl Protein Viewer:ENSP00000340514.2Re-query CCDS DB by Nucleotide ID:ENST00000344099Re-query CCDS DB by Protein ID:ENSP00000340514
Original member Current member NCBI NM_021030.3 NP_066358.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021030.3Link to Protein Sequence:NP_066358.2Re-query CCDS DB by Nucleotide ID:NM_021030Re-query CCDS DB by Protein ID:NP_066358Link to BLAST:NP_066358.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066358.2 642 P17017 642 100% 0 0

Chromosomal Locations for CCDS 12409.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 19711352 19713089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19714091 19714151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19714361 19714487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19732956 19732958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1929 nt):
ATGGACTCAGTCTCCTTTGAGGATGTGGCCGTGAACTTCACCCTGGAGGAGTGGGCTTTGCTGGATTCTT
CACAGAAAAAGCTCTATGAAGATGTGATGCAGGAGACCTTCAAAAACCTGGTTTGTCTAGGAAAAAAGTG
GGAAGACCAGGACATTGAAGATGACCACAGAAACCAGGGGAAAAATCGAAGATGTCATATGGTTGAGAGA
CTCTGTGAAAGTAGAAGAGGTAGCAAATGTGGAGAAACCACTAGCCAGATGCCAAATGTTAATATCAACA
AGGAAACTTTTACTGGAGCAAAACCACATGAATGCAGCTTTTGTGGAAGAGACTTCATTCATCATTCGTC
CCTTAATAGGCACATGAGATCTCACACTGGACAGAAACCAAATGAGTATCAGGAATATGAAAAGCAACCA
TGTAAATGTAAAGCAGTTGGGAAAACCTTCAGTTATCACCACTGCTTTCGCAAACATGAAAGAACTCACA
CTGGAGTGAAGCCCTATGAATGTAAACAGTGTGGGAAAGCCTTTATATATTACCAGCCATTTCAAAGACA
TGAAAGGACTCATGCTGGACAGAAACCCTATGAATGTAAGCAATGTGGAAAAACCTTTATATATTACCAG
TCTTTTCAAAAACATGCTCATACTGGAAAGAAACCCTATGAATGTAAACAGTGTGGGAAAGCCTTTATAT
GTTACCAATCTTTTCAAAGACACAAAAGGACTCACACTGGAGAGAAACCCTATGAATGTAAGCAATGTGG
TAAGGCTTTCAGTTGTCCCACATACTTTCGAACTCATGAAAGAACTCACACTGGAGAAAAACCCTACAAA
TGTAAAGAATGTGGTAAAGCCTTCAGTTTTCTCAGTTCTTTTCGAAGGCATAAAAGGACTCATAGTGGAG
AGAAACCCTATGAATGTAAAGAATGTGGAAAAGCCTTCTTTTATTCTGCAAGCTTTCGAGCACATGTAAT
AATACACACTGGGGCTCGACCTTATAAATGTAAAGAATGTGGGAAAGCCTTCAACTCTTCTAATTCCTGT
CGAGTGCATGAAAGAACTCATATTGGAGAAAAACCATATGAATGTAAACGATGTGGCAAATCATTCAGTT
GGTCCATTTCTCTTCGATTGCATGAAAGAACTCATACTGGAGAGAAACCTTATGAGTGTAAACAGTGTCA
TAAAACCTTCAGTTTTTCAAGTTCCCTTCGAGAACACGAAACAACTCACACTGGAGAGAAACCCTATGAA
TGTAAACAATGTGGTAAAACCTTCAGTTTTTCAAGTTCCCTTCAAAGACATGAAAGGACTCACAATGCAG
AGAAACCCTATGAATGTAAACAGTGTGGGAAAGCCTTCAGGTGTTCAAGTTATTTTCGAATTCATGAAAG
GTCACACACTGGAGAGAAACCCTATGAATGTAAACAGTGTGGAAAAGTTTTCATTCGTTCCAGTTCCTTT
CGACTGCATGAAAGAACACACACTGGAGAGAAACCCTATGAATGTAAACTATGCGGTAAAACCTTCAGTT
TTTCAAGTTCCCTTCGAGAACATGAAAAAATTCACACTGGAAATAAGCCTTTTGAGTGTAAGCAATGTGG
TAAGGCCTTCCTTCGTTCCAGTCAAATTCGATTGCATGAAAGGACTCACACTGGAGAGAAACCGTATCAA
TGTAAACAATGTGGAAAAGCCTTCATTTCTTCCAGTAAATTTCGAATGCATGAGAGAACTCACACGGGAG
AGAAACCCTATCGATGTAAACAATGTGGGAAAGCCTTCAGATTTTCAAGTTCTGTTCGAATTCATGAAAG
GTCTCACACTGGAGAGAAACCTTATGAATGCAAACAATGTGGAAAAGCCTTCATTTCTTCCAGTCACTTT
CGACTGCATGAAAGGACTCATATGGGAGAGAAAGTCTAA

Translation (642 aa):
MDSVSFEDVAVNFTLEEWALLDSSQKKLYEDVMQETFKNLVCLGKKWEDQDIEDDHRNQGKNRRCHMVER
LCESRRGSKCGETTSQMPNVNINKETFTGAKPHECSFCGRDFIHHSSLNRHMRSHTGQKPNEYQEYEKQP
CKCKAVGKTFSYHHCFRKHERTHTGVKPYECKQCGKAFIYYQPFQRHERTHAGQKPYECKQCGKTFIYYQ
SFQKHAHTGKKPYECKQCGKAFICYQSFQRHKRTHTGEKPYECKQCGKAFSCPTYFRTHERTHTGEKPYK
CKECGKAFSFLSSFRRHKRTHSGEKPYECKECGKAFFYSASFRAHVIIHTGARPYKCKECGKAFNSSNSC
RVHERTHIGEKPYECKRCGKSFSWSISLRLHERTHTGEKPYECKQCHKTFSFSSSLREHETTHTGEKPYE
CKQCGKTFSFSSSLQRHERTHNAEKPYECKQCGKAFRCSSYFRIHERSHTGEKPYECKQCGKVFIRSSSF
RLHERTHTGEKPYECKLCGKTFSFSSSLREHEKIHTGNKPFECKQCGKAFLRSSQIRLHERTHTGEKPYQ
CKQCGKAFISSSKFRMHERTHTGEKPYRCKQCGKAFRFSSSVRIHERSHTGEKPYECKQCGKAFISSSHF
RLHERTHMGEKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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