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Report for CCDS12433.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12433.1 Public Homo sapiens 19 CHST8 24 110 108 CCDS HistoryNCBI Gene:64377Re-query CCDS DB by CCDS ID:12433.1Re-query CCDS DB by GeneID:64377See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12433.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262622.4 ENSP00000262622.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000262622.4Link to Ensembl Protein Viewer:ENSP00000262622.3Re-query CCDS DB by Nucleotide ID:ENST00000262622Re-query CCDS DB by Protein ID:ENSP00000262622
Original member Current member EBI ENST00000434302.5 ENSP00000392604.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434302.5Link to Ensembl Protein Viewer:ENSP00000392604.1Re-query CCDS DB by Nucleotide ID:ENST00000434302Re-query CCDS DB by Protein ID:ENSP00000392604
Original member Current member EBI ENST00000438847.7 ENSP00000393879.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000438847.7Link to Ensembl Protein Viewer:ENSP00000393879.1Re-query CCDS DB by Nucleotide ID:ENST00000438847Re-query CCDS DB by Protein ID:ENSP00000393879
Original member Current member EBI ENST00000650847.1 ENSP00000499084.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000650847.1Link to Ensembl Protein Viewer:ENSP00000499084.1Re-query CCDS DB by Nucleotide ID:ENST00000650847Re-query CCDS DB by Protein ID:ENSP00000499084
Original member Current member NCBI NM_001127895.2 NP_001121367.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001127895.2Link to Protein Sequence:NP_001121367.1Re-query CCDS DB by Nucleotide ID:NM_001127895Re-query CCDS DB by Protein ID:NP_001121367Link to BLAST:NP_001121367.1
Original member Current member NCBI NM_001127896.2 NP_001121368.1 Accepted alive Link to Nucleotide Sequence:NM_001127896.2Link to Protein Sequence:NP_001121368.1Re-query CCDS DB by Nucleotide ID:NM_001127896Re-query CCDS DB by Protein ID:NP_001121368Link to BLAST:NP_001121368.1
Original member Current member NCBI NM_022467.3 NP_071912.2 Accepted alive Link to Nucleotide Sequence:NM_022467.3Link to Protein Sequence:NP_071912.2Re-query CCDS DB by Nucleotide ID:NM_022467Re-query CCDS DB by Protein ID:NP_071912Link to BLAST:NP_071912.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121367.1 424 Q9H2A9 424 100% 0 0
NP_001121368.1 424 Q9H2A9 424 100% 0 0
NP_071912.2 424 Q9H2A9 424 100% 0 0

Chromosomal Locations for CCDS 12433.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 33689262 33689391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33771413 33771450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33771957 33773063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1275 nt):
ATGACCCTGCGACCTGGAACAATGCGGCTGGCCTGCATGTTCTCTTCCATCCTGCTGTTCGGAGCTGCAG
GCCTCCTCCTCTTCATCAGCCTGCAGGACCCTACGGAGCTCGCCCCCCAGCAGGTGCCAGGAATAAAGTT
CAACATCAGGCCAAGGCAGCCCCACCACGACCTCCCACCAGGCGGCTCCCAGGATGGTGACTTGAAGGAA
CCCACAGAGAGGGTCACTCGGGACTTATCCAGTGGGGCCCCGAGGGGCCGCAACCTGCCAGCGCCTGACC
AGCCTCAACCCCCGCTGCAGAGGGGAACCCGTCTGCGGCTCCGCCAGCGCCGTCGCCGTCTGCTCATCAA
GAAAATGCCAGCTGCGGCGACCATCCCGGCCAACAGCTCGGACGCGCCCTTCATCCGGCCGGGACCCGGG
ACGCTGGATGGCCGCTGGGTCAGCCTGCACCGGAGCCAGCAGGAGCGCAAGCGGGTGATGCAGGAGGCCT
GCGCCAAGTACCGGGCGAGCAGCAGCCGCCGGGCCGTCACGCCCCGCCACGTGTCCCGTATCTTCGTGGA
GGACCGCCACCGCGTGCTCTACTGCGAGGTGCCCAAGGCCGGCTGCTCCAATTGGAAGCGGGTGCTCATG
GTGCTGGCCGGCCTGGCCTCGTCCACTGCCGACATCCAGCACAACACCGTCCACTATGGCAGCGCTCTCA
AGCGCCTGGACACCTTCGACCGCCAGGGTATCTTGCACCGTCTCAGCACCTACACCAAGATGCTCTTTGT
CCGCGAGCCCTTCGAGAGGCTGGTGTCCGCCTTCCGCGACAAGTTTGAGCACCCCAACAGCTACTATCAC
CCGGTCTTCGGCAAGGCCATCCTGGCCCGGTACCGCGCCAATGCCTCTCGGGAGGCCCTGCGGACCGGCT
CTGGGGTGCGTTTTCCCGAGTTCGTCCAGTACCTGCTGGACGTGCACCGGCCCGTGGGGATGGACATTCA
CTGGGACCATGTCAGCCGGCTCTGCAGCCCCTGCCTCATCGACTACGATTTCGTAGGCAAGTTCGAGAGC
ATGGAGGACGATGCCAACTTCTTCCTGAGCCTCATCCGCGCGCCGCGGAACCTGACCTTCCCCCGGTTCA
AGGACCGGCACTCGCAGGAGGCGCGGACCACAGCGAGGATCGCCCACCAGTACTTCGCCCAACTCTCGGC
CCTGCAAAGGCAGCGCACCTACGACTTCTACTACATGGATTACCTGATGTTCAACTATTCCAAGCCCTTT
GCAGATCTGTACTGA

Translation (424 aa):
MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKE
PTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAPFIRPGPG
TLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLM
VLAGLASSTADIQHNTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYH
PVFGKAILARYRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFES
MEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF
ADLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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