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Report for CCDS12448.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12448.1 Public Homo sapiens 19 FAM187B 24 110 108 CCDS HistoryNCBI Gene:148109Re-query CCDS DB by CCDS ID:12448.1Re-query CCDS DB by GeneID:148109See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12448.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324675.4 ENSP00000323355.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324675.4Link to Ensembl Protein Viewer:ENSP00000323355.3Re-query CCDS DB by Nucleotide ID:ENST00000324675Re-query CCDS DB by Protein ID:ENSP00000323355
Original member Current member NCBI NM_152481.2 NP_689694.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152481.2Link to Protein Sequence:NP_689694.1Re-query CCDS DB by Nucleotide ID:NM_152481Re-query CCDS DB by Protein ID:NP_689694Link to BLAST:NP_689694.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689694.1 369 Q17R55 369 100% 0 0

Chromosomal Locations for CCDS 12448.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35224825 35225212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35227959 35228680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGCCACCCATGCTGTGGCTGCTGCTCCACTTTGCTGCCCCGGCACTGGGGTTCTACTTTTCCATCAGCT
GCCCCAGTGGTAAGCAGTGCCAACAGGCCCTACTCTCAGGCAATGATATTCTCCTGTATTGCAACTCCTC
GGGGGCGCACTGGTACTATTTATTCACACAAGGCAAGAAGGGCAGGCTCACCAGCCTCACCAATATTTCC
AATATGGAAATAATGCCCGAGGGCAGCCTTCTCATTAAAGATCCATTGCCCTCCCAGACGGGCCTCTACC
ACTGCTGGAACAAGAATGGCCGCCAAGTGGTGCAGTATGAAATTGACTTTCAGGATGTCACCACCCTGCA
TATAACACACAAGGACCTGGGTCAGAGGCCCCTGCAGAACGAGACCCTGCATTTGGGCAGCAAACAGCTC
ATTTTTACCTGGTGGGAGCCCTGGCAGGACTGCAACCGCTGTGAGGAGCCGGGCGAGTGTAAACGCCTGG
GGTACCGCTACATTGAGGAGCCTCTGGAGGAAGCCATGCCCTGCTGGCTCTATCTGGGAGAGGTGCTGGT
GTGGTCTAGCCGCTTGCGGCCTGAGCTGCAGGTGGAAGCCTGCCACGTCCAGTGCACCAATAACACACAG
TTAAGGGTGGATTACGTCATTTTTGACAACTTCAGGCTCGATGAGAAGACAGAATTTGTGTGGCTCGACT
GTCCCTTAGGATCCATGTACAGGCCCGTCAACTGGCGTGCCAACGACACCCCCCTGACGTGGGAGAGCCA
GCTCTCCGGCCAGGACTTCACCACCTTTCTGGACCCCTCCACCGGCGGCAGGCAGCTGCAGGTTTTCCAG
CCGGCCGTCTACAAGTGCTTCGTGCAGCAGGAGCTCGTGGCCCAGTTCAAACCCGCCGCCAGTCTGGAGA
CGCTGGAGGCTCAGTGGAGAGAGAACGATGCCCAGTGGCGGGAGGCAAGGAAGGCCCTGCGGGGCAGGGC
GGACTCCGTGCTCAAGGGGCTGAAGCTGGTGCTGCTCGTGGTCACCGTCCTGGCCCTGCTGGGGGCGCTG
CTCAAGTGCATCCACCCTTCCCCGGGCAGGAGAAGCACACAGGTGCTGGTGGTGAAATAA

Translation (369 aa):
MPPMLWLLLHFAAPALGFYFSISCPSGKQCQQALLSGNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNIS
NMEIMPEGSLLIKDPLPSQTGLYHCWNKNGRQVVQYEIDFQDVTTLHITHKDLGQRPLQNETLHLGSKQL
IFTWWEPWQDCNRCEEPGECKRLGYRYIEEPLEEAMPCWLYLGEVLVWSSRLRPELQVEACHVQCTNNTQ
LRVDYVIFDNFRLDEKTEFVWLDCPLGSMYRPVNWRANDTPLTWESQLSGQDFTTFLDPSTGGRQLQVFQ
PAVYKCFVQQELVAQFKPAASLETLEAQWRENDAQWREARKALRGRADSVLKGLKLVLLVVTVLALLGAL
LKCIHPSPGRRSTQVLVVK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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