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Report for CCDS12501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12501.1 Public Homo sapiens 19 ZNF383 24 110 108 CCDS HistoryNCBI Gene:163087Re-query CCDS DB by CCDS ID:12501.1Re-query CCDS DB by GeneID:163087See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12501.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000352998.7 ENSP00000340132.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000352998.7Link to Ensembl Protein Viewer:ENSP00000340132.2Re-query CCDS DB by Nucleotide ID:ENST00000352998Re-query CCDS DB by Protein ID:ENSP00000340132
Original member Current member EBI ENST00000589413.5 ENSP00000464871.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589413.5Link to Ensembl Protein Viewer:ENSP00000464871.1Re-query CCDS DB by Nucleotide ID:ENST00000589413Re-query CCDS DB by Protein ID:ENSP00000464871
Original member Current member EBI ENST00000590503.5 ENSP00000466101.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590503.5Link to Ensembl Protein Viewer:ENSP00000466101.1Re-query CCDS DB by Nucleotide ID:ENST00000590503Re-query CCDS DB by Protein ID:ENSP00000466101
Original member Current member EBI ENST00000684119.1 ENSP00000507972.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000684119.1Link to Ensembl Protein Viewer:ENSP00000507972.1Re-query CCDS DB by Nucleotide ID:ENST00000684119Re-query CCDS DB by Protein ID:ENSP00000507972
Original member Current member NCBI NM_001345947.2 NP_001332876.1 Accepted alive Link to Nucleotide Sequence:NM_001345947.2Link to Protein Sequence:NP_001332876.1Re-query CCDS DB by Nucleotide ID:NM_001345947Re-query CCDS DB by Protein ID:NP_001332876Link to BLAST:NP_001332876.1
Original member Current member NCBI NM_001345948.2 NP_001332877.1 Accepted alive Link to Nucleotide Sequence:NM_001345948.2Link to Protein Sequence:NP_001332877.1Re-query CCDS DB by Nucleotide ID:NM_001345948Re-query CCDS DB by Protein ID:NP_001332877Link to BLAST:NP_001332877.1
Original member Current member NCBI NM_001345949.3 NP_001332878.1 Accepted alive Link to Nucleotide Sequence:NM_001345949.3Link to Protein Sequence:NP_001332878.1Re-query CCDS DB by Nucleotide ID:NM_001345949Re-query CCDS DB by Protein ID:NP_001332878Link to BLAST:NP_001332878.1
Original member Current member NCBI NM_001387593.1 NP_001374522.1 Accepted alive Link to Nucleotide Sequence:NM_001387593.1Link to Protein Sequence:NP_001374522.1Re-query CCDS DB by Nucleotide ID:NM_001387593Re-query CCDS DB by Protein ID:NP_001374522Link to BLAST:NP_001374522.1
Original member Current member NCBI NM_001387594.1 NP_001374523.1 Accepted alive Link to Nucleotide Sequence:NM_001387594.1Link to Protein Sequence:NP_001374523.1Re-query CCDS DB by Nucleotide ID:NM_001387594Re-query CCDS DB by Protein ID:NP_001374523Link to BLAST:NP_001374523.1
Original member Current member NCBI NM_001387595.1 NP_001374524.1 Accepted alive Link to Nucleotide Sequence:NM_001387595.1Link to Protein Sequence:NP_001374524.1Re-query CCDS DB by Nucleotide ID:NM_001387595Re-query CCDS DB by Protein ID:NP_001374524Link to BLAST:NP_001374524.1
Original member Current member NCBI NM_001387596.1 NP_001374525.1 Accepted alive Link to Nucleotide Sequence:NM_001387596.1Link to Protein Sequence:NP_001374525.1Re-query CCDS DB by Nucleotide ID:NM_001387596Re-query CCDS DB by Protein ID:NP_001374525Link to BLAST:NP_001374525.1
Original member Current member NCBI NM_001387597.1 NP_001374526.1 Accepted alive Link to Nucleotide Sequence:NM_001387597.1Link to Protein Sequence:NP_001374526.1Re-query CCDS DB by Nucleotide ID:NM_001387597Re-query CCDS DB by Protein ID:NP_001374526Link to BLAST:NP_001374526.1
Original member Current member NCBI NM_001387598.1 NP_001374527.1 Accepted alive Link to Nucleotide Sequence:NM_001387598.1Link to Protein Sequence:NP_001374527.1Re-query CCDS DB by Nucleotide ID:NM_001387598Re-query CCDS DB by Protein ID:NP_001374527Link to BLAST:NP_001374527.1
Original member Current member NCBI NM_001387599.1 NP_001374528.1 Accepted alive Link to Nucleotide Sequence:NM_001387599.1Link to Protein Sequence:NP_001374528.1Re-query CCDS DB by Nucleotide ID:NM_001387599Re-query CCDS DB by Protein ID:NP_001374528Link to BLAST:NP_001374528.1
Original member Current member NCBI NM_001387600.1 NP_001374529.1 Accepted alive Link to Nucleotide Sequence:NM_001387600.1Link to Protein Sequence:NP_001374529.1Re-query CCDS DB by Nucleotide ID:NM_001387600Re-query CCDS DB by Protein ID:NP_001374529Link to BLAST:NP_001374529.1
Original member Current member NCBI NM_001387601.1 NP_001374530.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001387601.1Link to Protein Sequence:NP_001374530.1Re-query CCDS DB by Nucleotide ID:NM_001387601Re-query CCDS DB by Protein ID:NP_001374530Link to BLAST:NP_001374530.1
Original member Current member NCBI NM_001387602.1 NP_001374531.1 Accepted alive Link to Nucleotide Sequence:NM_001387602.1Link to Protein Sequence:NP_001374531.1Re-query CCDS DB by Nucleotide ID:NM_001387602Re-query CCDS DB by Protein ID:NP_001374531Link to BLAST:NP_001374531.1
Original member Current member NCBI NM_152604.3 NP_689817.1 Accepted alive Link to Nucleotide Sequence:NM_152604.3Link to Protein Sequence:NP_689817.1Re-query CCDS DB by Nucleotide ID:NM_152604Re-query CCDS DB by Protein ID:NP_689817Link to BLAST:NP_689817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001332876.1 475 Q8NA42 475 100% 0 0
NP_001332877.1 475 Q8NA42 475 100% 0 0
NP_001332878.1 475 Q8NA42 475 100% 0 0
NP_001374522.1 475 Q8NA42 475 100% 0 0
NP_001374523.1 475 Q8NA42 475 100% 0 0
NP_001374524.1 475 Q8NA42 475 100% 0 0
NP_001374525.1 475 Q8NA42 475 100% 0 0
NP_001374526.1 475 Q8NA42 475 100% 0 0
NP_001374527.1 475 Q8NA42 475 100% 0 0
NP_001374528.1 475 Q8NA42 475 100% 0 0
NP_001374529.1 475 Q8NA42 475 100% 0 0
NP_001374530.1 475 Q8NA42 475 100% 0 0
NP_001374531.1 475 Q8NA42 475 100% 0 0
NP_689817.1 475 Q8NA42 475 100% 0 0

Chromosomal Locations for CCDS 12501.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37230454 37230462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37235549 37235675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37235979 37236074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37242469 37243664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGGCTGAGGGATCAGTGATGTTCAGTGATGTGTCCATAGACTTCTCTCAGGAGGAGTGGGACTGCCTGG
ACCCTGTTCAGAGGGACTTATACAGAGATGTGATGTTGGAGAACTACGGCAATCTGGTTTCAATGGGACT
TTACACTCCTAAGCCTCAAGTGATCTCCTTATTGGAACAAGGGAAAGAGCCCTGGATGGTTGGCAGAGAG
CTTACAAGAGGCCTGTGTTCAGATCTGGAATCGATGTGTGAAACCAAGTTATTATCTCTAAAGAAGGAAG
TTTATGAAATAGAATTATGCCAGAGGGAGATAATGGGACTTACAAAGCATGGCCTTGAGTACTCCAGTTT
TGGAGATGTTTTGGAATATAGAAGCCACCTTGCAAAACAACTGGGATATCCAAATGGGCATTTTAGTCAA
GAAATATTCACTCCTGAATACATGCCCACATTTATTCAACAGACATTCCTTACTCTCCATCAAATAATTA
ATAATGAAGACAGACCCTATGAATGTAAGAAATGTGGAAAGGCCTTTAGTCAGAACTCACAATTTATTCA
ACATCAGAGAATTCATATTGGTGAAAAATCTTATGAATGTAAAGAGTGTGGGAAATTCTTTAGTTGTGGT
TCACATGTTACTCGGCATCTGAAAATTCATACTGGCGAAAAACCCTTTGAATGTAAGGAATGTGGAAAGG
CCTTCAGTTGTAGCTCATACCTTTCTCAACATCAGAGAATCCATACCGGTAAGAAACCCTATGAATGTAA
GGAATGTGGGAAGGCCTTTAGTTATTGCTCAAATCTTATTGACCATCAGCGAATTCACACTGGTGAAAAA
CCTTATGAATGTAAAGTATGTGGGAAAGCCTTTACTAAGAGCTCACAACTTTTTCAGCATGCACGAATTC
ATACAGGTGAGAAACCCTATGAATGTAAGGAATGTGGCAAAGCCTTTACCCAGAGCTCAAAGCTTGTTCA
ACATCAGAGAATTCATACTGGTGAGAAACCCTATGAGTGCAAGGAATGTGGCAAAGCCTTTAGTAGTGGC
TCAGCACTTACTAATCATCAGAGAATTCACACTGGTGAGAAACCCTATGATTGTAAGGAATGTGGAAAGG
CTTTTACTCAGAGCTCACAGCTTCGTCAACATCAGAGAATTCACGCTGGTGAGAAACCCTTTGAATGTCT
TGAATGTGGGAAGGCCTTTACTCAGAACTCACAACTTTTCCAGCATCAGAGAATTCATACAGATGAAAAA
CCATATGAATGTAATGAATGTGGAAAGGCCTTTAATAAATGCTCAAACCTTACTCGACATCTGAGAATTC
ACACTGGTGAAAAGCCCTATAACTGTAAGGAATGTGGGAAGGCTTTTAGTAGTGGCTCGGATCTCATTCG
TCATCAGGGAATTCATACTAATAAATAA

Translation (475 aa):
MAEGSVMFSDVSIDFSQEEWDCLDPVQRDLYRDVMLENYGNLVSMGLYTPKPQVISLLEQGKEPWMVGRE
LTRGLCSDLESMCETKLLSLKKEVYEIELCQREIMGLTKHGLEYSSFGDVLEYRSHLAKQLGYPNGHFSQ
EIFTPEYMPTFIQQTFLTLHQIINNEDRPYECKKCGKAFSQNSQFIQHQRIHIGEKSYECKECGKFFSCG
SHVTRHLKIHTGEKPFECKECGKAFSCSSYLSQHQRIHTGKKPYECKECGKAFSYCSNLIDHQRIHTGEK
PYECKVCGKAFTKSSQLFQHARIHTGEKPYECKECGKAFTQSSKLVQHQRIHTGEKPYECKECGKAFSSG
SALTNHQRIHTGEKPYDCKECGKAFTQSSQLRQHQRIHAGEKPFECLECGKAFTQNSQLFQHQRIHTDEK
PYECNECGKAFNKCSNLTRHLRIHTGEKPYNCKECGKAFSSGSDLIRHQGIHTNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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