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Report for CCDS12623.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
12623.1 |
Public |
Homo sapiens |
19 |
ZNF575 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:284346](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:12623.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:284346](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 12623.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000314228.10 |
ENSP00000315870.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000314228.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000315870.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000314228](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000315870](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000598080.6 |
ENSP00000471083.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000598080.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000471083.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000598080](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000471083](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000601282.1 |
ENSP00000472578.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000601282.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000472578.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000601282](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000472578](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394237.1 |
NP_001381166.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394237.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381166.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394237](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381166](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381166.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_174945.3 |
NP_777605.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_174945.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_777605.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_174945](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_777605](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_777605.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 12623.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (738 nt): ATGCTGGAGCGAGGCGCGGAGTCCGCGGCCGGGGCTACCGATCCTAGTCCCACTGGCAAGGAACCAGTGA CCAAAGAAGCTCCCCACCAGGGCCCACCGCAGAAGCCCAGCCAGTCAGCTCCAGGGCCCACCGCGTCCGC GGGCTCGCCTCCCCGGCCTCGCCGGCGGCCCCCGCCCCAGCGCCCGCACCGCTGCCCCGACTGTGACAAG GCCTTCTCGTACCCGTCCAAGCTGGCCACGCACCGCTTAGCACACGGAGGCGCCCGACCCCACCCATGCC CAGACTGCCCCAAGGCCTTCTCCTACCCCTCCAAGCTGGCAGCCCACCGCCTCACGCACAGCGGCGCCCG CCCGCACCCGTGCCCACACTGCCCGAAGTCCTTTGGCCACCGCTCCAAGCTGGCGGCTCACCTCTGGACC CACGCACCCACCCGCCCCTACCCGTGCCCCGACTGCCCCAAGTCCTTCTGCTACCCTTCCAAGCTGGCGG CCCACCGCCACACGCACCACGCCACCGACGCCCGCCCCTATCCTTGCCCGCATTGCCCCAAGGCTTTCTC ATTTCCCTCCAAGCTGGCCGCCCATCGCCTATGTCACGACCCCCCAACCGCGCCCGGCAGCCAGGCGACT GCCTGGCACCGATGCTCCAGCTGCGGCCAGGCCTTTGGCCAGAGACGCTTACTGCTCCTTCATCAACGCA GCCACCACCAGGTGGAGCACAAGGGGGAGAGAGACTGA
Translation (245 aa): MLERGAESAAGATDPSPTGKEPVTKEAPHQGPPQKPSQSAPGPTASAGSPPRPRRRPPPQRPHRCPDCDK AFSYPSKLATHRLAHGGARPHPCPDCPKAFSYPSKLAAHRLTHSGARPHPCPHCPKSFGHRSKLAAHLWT HAPTRPYPCPDCPKSFCYPSKLAAHRHTHHATDARPYPCPHCPKAFSFPSKLAAHRLCHDPPTAPGSQAT AWHRCSSCGQAFGQRRLLLLHQRSHHQVEHKGERD
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