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Report for CCDS12670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12670.1 Public Homo sapiens 19 EML2 24 110 108 CCDS HistoryNCBI Gene:24139Re-query CCDS DB by CCDS ID:12670.1Re-query CCDS DB by GeneID:24139See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12670.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000245925.8 ENSP00000245925.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000245925.8Link to Ensembl Protein Viewer:ENSP00000245925.3Re-query CCDS DB by Nucleotide ID:ENST00000245925Re-query CCDS DB by Protein ID:ENSP00000245925
Original member Current member NCBI NM_012155.4 NP_036287.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012155.4Link to Protein Sequence:NP_036287.1Re-query CCDS DB by Nucleotide ID:NM_012155Re-query CCDS DB by Protein ID:NP_036287Link to BLAST:NP_036287.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036287.1 649 O95834-1 649 100% 0 0

Chromosomal Locations for CCDS 12670.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45609663 45609788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45613541 45613671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45614605 45614700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45615802 45615889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45616461 45616558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45616765 45616853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45617630 45617697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45619060 45619191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45621207 45621332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45621483 45621637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45624719 45624818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45626705 45626839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45629951 45630046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45632861 45632971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45633070 45633139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45634322 45634471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45638505 45638634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45638845 45638873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45639357 45639376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1950 nt):
ATGAGTAGCTTTGGAGCTGGCAAAACCAAAGAAGTTATCTTCAGTGTGGAGGATGGCTCCGTGAAAATGT
TCCTGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACGAGCTGGCACCCACCTACAGCCTGGACACACG
CTCGGAGCTGCCTTCTTGCCGGCTCAAGCTGGAGTGGGTCTATGGCTACCGTGGCCGAGACTGCCGGGCC
AACCTTTATTTGCTGCCCACCGGGGAGATAGTGTACTTTGTGGCCTCCGTAGCCGTGCTATACAGCGTGG
AGGAGCAGAGGCAGCGACACTACCTGGGACACAACGATGACATCAAATGCTTGGCCATCCACCCAGATAT
GGTCACCATCGCCACGGGACAGGTGGCGGGAACCACTAAGGAAGGGAAGCCGCTGCCGCCCCACGTGCGC
ATCTGGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGGGCTTGGGGGTGTTTGACAGAGCCGTGTGCT
GTGTGGGCTTCTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGTGGATGAATCCAATGATCACATGCT
CTCGGTGTGGGACTGGGCCAAGGAGACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGGCTGTATTGGTG
GCCACCTTCCACCCCACGGACCCCACTGTGCTTATCACCTGCGGGAAATCTCACATCTACTTCTGGACCT
TGGAGGGGGGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTG
TGTGACCTTTTTGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGGGGAACCTCTATGTTTGGGGCAAA
GGTGGGAACCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTTTGGGCTCTGCGCCCTGC
GGGACGGGACGCTGGTGTCTGGAGGGGGCCGTGATCGGCGGGTGGTCCTCTGGGGTTCTGACTACAGCAA
GCTGCAGGAAGTGGAGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACA
CTGTACGTGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACTGCTGGTCC
AGGGCCATGTGGAAGAGCTGTGGGGCCTGGCCACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGGGCA
GGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAGGATCATCGAGGACCCT
GCCCGCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGGCTGTGGGTACAGTGACTGGCAGATGGCTGC
TGCTGGACACGGAGACCCATGACCTGGTGGCTATCCACACAGACGGCAATGAACAGATCTCAGTGGTCAG
CTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTACACGGTGGAC
CAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATT
GGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGGGGACTATGAGATTCTGTACTGGGACCCGGCTAC
CTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAATGGGCCACAGCTACTTGTGTCCTAGGG
TTTGGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCTGTGGCCCGCTCTCATG
ATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGGCAAAGTTCACCTGTTTAGCTACCCCTGCTGTCAGCC
TCGAGCCCTCAGCCACAAGTACGGTGGACACAGCAGCCATGTGACAAATGTGGCCTTCTTGTGGGATGAC
AGCATGGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGA

Translation (649 aa):
MSSFGAGKTKEVIFSVEDGSVKMFLRGRPVPMMIPDELAPTYSLDTRSELPSCRLKLEWVYGYRGRDCRA
NLYLLPTGEIVYFVASVAVLYSVEEQRQRHYLGHNDDIKCLAIHPDMVTIATGQVAGTTKEGKPLPPHVR
IWDSVSLSTLHVLGLGVFDRAVCCVGFSKSNGGNLLCAVDESNDHMLSVWDWAKETKVVDVKCSNEAVLV
ATFHPTDPTVLITCGKSHIYFWTLEGGSLSKRQGLFEKHEKPKYVLCVTFLEGGDVVTGDSGGNLYVWGK
GGNRITQAVLGAHDGGVFGLCALRDGTLVSGGGRDRRVVLWGSDYSKLQEVEVPEDFGPVRTVAEGHGDT
LYVGTTRNSILQGSVHTGFSLLVQGHVEELWGLATHPSRAQFVTCGQDKLVHLWSSDSHQPLWSRIIEDP
ARSAGFHPSGSVLAVGTVTGRWLLLDTETHDLVAIHTDGNEQISVVSFSPDGAYLAVGSHDNLVYVYTVD
QGGRKVSRLGKCSGHSSFITHLDWAQDSSCFVTNSGDYEILYWDPATCKQITSADAVRNMEWATATCVLG
FGVFGIWSEGADGTDINAVARSHDGKLLASADDFGKVHLFSYPCCQPRALSHKYGGHSSHVTNVAFLWDD
SMALTTGGKDTSVLQWRVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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