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Report for CCDS12739.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12739.1 Public Homo sapiens 19 TULP2 24 110 108 CCDS HistoryNCBI Gene:7288Re-query CCDS DB by CCDS ID:12739.1Re-query CCDS DB by GeneID:7288See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12739.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221399.8 ENSP00000221399.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221399.8Link to Ensembl Protein Viewer:ENSP00000221399.3Re-query CCDS DB by Nucleotide ID:ENST00000221399Re-query CCDS DB by Protein ID:ENSP00000221399
Original member Current member NCBI NM_003323.3 NP_003314.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003323.3Link to Protein Sequence:NP_003314.2Re-query CCDS DB by Nucleotide ID:NM_003323Re-query CCDS DB by Protein ID:NP_003314Link to BLAST:NP_003314.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003314.2 520 O00295 520 100% 0 0

Chromosomal Locations for CCDS 12739.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 48881011 48881126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48882032 48882203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48883754 48883852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48883932 48884046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48885448 48885560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48887950 48888261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48889510 48889631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48894998 48895162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48895366 48895503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48896430 48896556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48897345 48897396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48897837 48897868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGTCTCAGGATAATGACACATTGATGAGAGACATCCTGGGGCATGAGCTCGCTGCTATGAGGCTGCAGA
AGCTGGAACAGCAGCGGCGGCTGTTTGAAAAGAAGCAGCGACAGAAGCGCCAGGAGCTCCTCATGGTTCA
GGCCAATCCTGACGCTTCCCCGTGGCTTTGGCGCTCTTGTCTGCGGGAGGAGCGCCTTTTAGGTGACAGA
GGCCTTGGGAACCCTTTCCTCCGGAAGAAAGTGTCAGAGGCACATCTGCCCTCTGGCATCCACAGTGCCC
TGGGCACCGTGAGCTGTGGTGGAGACGGCAGGGGCGAGCGCGGCCTCCCGACACCGCGGACAGAAGCAGT
GTTCAGGAATCTCGGTCTCCAGTCCCCTTTCTTATCCTGGCTCCCAGACAATTCCGATGCAGAATTGGAG
GAAGTCTCCGTGGAGAATGGTTCCGTCTCTCCCCCACCTTTTAAACAGTCTCCGAGAATCCGACGCAAGG
GTTGGCAAGCCCACCAACGACCTGGGACCCGTGCAGAGGGTGAGAGTGACTCCCAGGATATGGGAGATGC
ACACAAGTCACCCAATATGGGACCAAACCCTGGAATGGATGGTGACTGTGTATATGAAAACTTGGCCTTC
CAAAAGGAAGAAGACTTGGAAAAGAAGAGAGAGGCCTCTGAGTCTACAGGGACGAACTCCTCAGCAGCAC
ACAACGAAGAGTTGTCCAAGGCCCTGAAAGGCGAGGGTGGCACGGACAGCGACCATATGAGGCACGAAGC
CTCCTTGGCAATCCGCTCCCCCTGCCCTGGGCTGGAGGAGGACATGGAAGCCTACGTGCTGCGGCCAGCG
CTCCCGGGCACCATGATGCAGTGCTACCTCACCCGTGACAAGCACGGCGTGGACAAGGGCTTGTTCCCCC
TCTACTACCTCTACCTGGAGACCTCTGACAGCCTGCAGCGCTTCCTCCTGGCTGGGCGAAAGAGAAGAAG
GAGCAAAACTTCTAATTACCTCATCTCCCTGGATCCTACACACCTATCTCGGGACGGGGACAATTTCGTG
GGCAAAGTCAGATCCAATGTCTTCAGCACCAAGTTCACCATCTTTGACAATGGGGTGAATCCTGACCGGG
AGCATTTAACCAGGAATACTGCCCGGATCAGACAGGAGCTGGGGGCTGTGTGTTATGAGCCCAACGTCTT
AGGATACCTGGGGCCTCGGAAAATGACTGTGATTCTCCCAGGAACCAACAGCCAGAACCAGCGAATCAAT
GTCCAGCCACTAAATGAACAGGAGTCGCTACTGAGTCGTTACCAACGTGGGGACAAACAAGGGTTGCTTT
TGTTGCACAACAAAACCCCGTCGTGGGACAAGGAGAACGGTGTCTACACGCTCAATTTCCATGGTCGAGT
CACTCGGGCTTCGGTGAAGAACTTCCAAATCGTGGATCCCAAACACCAAGAACATCTGGTGCTCCAGTTC
GGCCGAGTGGGCCCAGACACATTCACCATGGACTTCTGCTTTCCATTTAGCCCGCTCCAGGCCTTCAGCA
TCTGCTTGTCCAGTTTCAATTAG

Translation (520 aa):
MSQDNDTLMRDILGHELAAMRLQKLEQQRRLFEKKQRQKRQELLMVQANPDASPWLWRSCLREERLLGDR
GLGNPFLRKKVSEAHLPSGIHSALGTVSCGGDGRGERGLPTPRTEAVFRNLGLQSPFLSWLPDNSDAELE
EVSVENGSVSPPPFKQSPRIRRKGWQAHQRPGTRAEGESDSQDMGDAHKSPNMGPNPGMDGDCVYENLAF
QKEEDLEKKREASESTGTNSSAAHNEELSKALKGEGGTDSDHMRHEASLAIRSPCPGLEEDMEAYVLRPA
LPGTMMQCYLTRDKHGVDKGLFPLYYLYLETSDSLQRFLLAGRKRRRSKTSNYLISLDPTHLSRDGDNFV
GKVRSNVFSTKFTIFDNGVNPDREHLTRNTARIRQELGAVCYEPNVLGYLGPRKMTVILPGTNSQNQRIN
VQPLNEQESLLSRYQRGDKQGLLLLHNKTPSWDKENGVYTLNFHGRVTRASVKNFQIVDPKHQEHLVLQF
GRVGPDTFTMDFCFPFSPLQAFSICLSSFN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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