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Report for CCDS12758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12758.1 Public Homo sapiens 19 PPFIA3 24 110 108 CCDS HistoryNCBI Gene:8541Re-query CCDS DB by CCDS ID:12758.1Re-query CCDS DB by GeneID:8541See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12758.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334186.9 ENSP00000335614.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334186.9Link to Ensembl Protein Viewer:ENSP00000335614.3Re-query CCDS DB by Nucleotide ID:ENST00000334186Re-query CCDS DB by Protein ID:ENSP00000335614
Original member Current member NCBI NM_003660.4 NP_003651.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003660.4Link to Protein Sequence:NP_003651.1Re-query CCDS DB by Nucleotide ID:NM_003660Re-query CCDS DB by Protein ID:NP_003651Link to BLAST:NP_003651.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003651.1 1194 O75145-1 1194 100% 0 0

Chromosomal Locations for CCDS 12758.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49127874 49128113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49128367 49128468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49128848 49129012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49129380 49129454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49129993 49130067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49130378 49130599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49133001 49133147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49133237 49133371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49133796 49133879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49134034 49134165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49134639 49134701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49134836 49134915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49135779 49135923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49136724 49136911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49138205 49138427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49139668 49139831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49139961 49140088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49141420 49141513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49142034 49142115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49142804 49143004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49145943 49146005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49146166 49146192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49148083 49148258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49148666 49148763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49148993 49149168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49149257 49149325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49149547 49149718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49150080 49150138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3585 nt):
ATGATGTGCGAGGTGATGCCCACCATCAGCGAGGATGGCCGGCGGGGCTCGGCGCTGGGCCCGGACGAGG
CGGGCGGGGAGCTGGAGCGCCTCATGGTCACGATGCTCACGGAGCGCGAGCGCCTGCTGGAGACGCTGCG
CGAGGCACAGGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCTG
CAGCGCCAGCTCAGCATCGCGCTGCCCCAGGAGTTTGCAGCTCTGACGAAGGAGCTGAACTTATGTCGGG
AGCAGCTGCTGGAGAGGGAGGAAGAGATTGCAGAGCTGAAGGCGGAACGGAACAACACGCGGCTGCTCCT
GGAACACCTGGAGTGCCTGGTGTCCAGGCACGAGAGGTCACTGCGCATGACCGTGGTGAAGCGCCAGGCC
CAGTCCCCGGGTGGGGTCTCCTCGGAGGTAGAAGTGCTCAAAGCTCTAAAGTCTCTCTTCGAGCACCACA
AGGCCCTGGATGAGAAGGTCCGGGAGCGGCTGCGGATGGCGCTGGAGCGCGTGGCAGTGCTCGAGGAGGA
GCTGGAACTGAGCAATCAGGAGACTCTGAACCTTCGAGAACAGCTGTCTAGGCGGCGGTCAGGGCTGGAA
GAGCCGGGCAAGGATGGGGATGGGCAGACTCTTGCCAATGGCCTGGGTCCTGGCGGGGATTCCAACCGGC
GCACAGCAGAGCTGGAGGAGGCCCTGGAGCGGCAGCGCGCCGAGGTGTGCCAGCTGCGGGAGCGCCTGGC
GGTGCTGTGCCGTCAGATGAGCCAGCTGGAGGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAAGGCA
GAGGAAGCCAACTCCAAGCTGCAGCGCGACCTCAAGGAGGCGCTGGCGCAGCGGGAAGATATGGAGGAGC
GGATTACAACACTGGAGAAGCGCTACCTGAGCGCCCAGCGGGAGGCCACGTCTCTGCACGACGCCAACGA
CAAACTGGAGAACGAGTTAGCTAGCAAGGAGTCGTTGTATCGGCAGAGTGAAGAGAAGAGCCGTCAGCTG
GCCGAGTGGTTGGACGACGCCAAGCAGAAGCTGCAGCAGACGCTGCAGAAAGCGGAGACCTTGCCCGAGA
TAGAGGCGCAGCTGGCGCAGCGCGTGGCGGCGCTCAACAAGGCCGAGGAACGTCATGGGAATTTTGAGGA
GCGGCTTCGGCAGCTGGAGGCCCAGCTGGAAGAGAAGAATCAAGAGCTGCAGCGGGCCCGGCAGCGGGAG
AAGATGAACGATGACCACAATAAGCGGCTGTCCGAGACGGTGGACAAGCTGCTGAGCGAGTCCAACGAGC
GCTTACAGCTTCACCTCAAGGAGCGCATGGGGGCGCTGGAGGAGAAGAACTCCCTGAGCGAGGAGATAGC
CAACATGAAGAAGCTTCAGGATGAGTTGCTGCTAAACAAGGAGCAGCTCTTGGCCGAAATGGAGCGGATG
CAGATGGAGATCGACCAGCTGCGGGGGAGGCCACCATCCTCCTACTCCAGGTCTCTCCCTGGCAGTGCCC
TGGAGCTCCGTTACTCTCAGGCACCCACTTTACCTTCTGGTGCCCACCTGGATCCCTATGTGGCTGGCAG
TGGTCGGGCAGGCAAGAGGGGCCGCTGGTCAGGGGTCAAGGAGGAGCCCTCCAAGGATTGGGAGCGGTCT
GCCCCTGCGGGCTCCATACCACCCCCATTCCCTGGGGAACTGGACGGCTCCGATGAGGAGGAGGCAGAGG
GGATGTTTGGGGCCGAGCTGCTGTCCCCCAGTGGGCAGGCTGACGTGCAGACGCTGGCCATCATGCTTCA
GGAGCAGCTGGAGGCCATCAACAAGGAGATCAAGCTGATCCAAGAGGAGAAGGAGACAACAGAACAGAGG
GCAGAGGAGCTGGAGAGTCGGGTGTCCAGCTCTGGCTTGGACTCGTTGGGCCGCTACCGCAGCAGCTGCT
CCCTGCCCCCCTCCCTCACCACCTCTACCCTTGCCAGCCCCTCCCCTCCCAGCTCTGGCCACTCAACACC
CCGCCTGGCACCCCCTAGCCCTGCCCGTGAGGGCACCGACAAGGCTAATCATGTCCCTAAGGAGGAAGCT
GGAGCTCCACGAGGGGAGGGGCCGGCCATCCCAGGAGACACCCCACCACCCACTCCCCGCTCTGCCCGTC
TTGAGAGAATGACCCAGGCCTTGGCACTGCAGGCGGGGTCCCTGGAAGATGGGGGACCCCCACGGGGAAG
TGAGGGCACCCCAGATTCTCTGCACAAAGCCCCCAAGAAGAAGAGCATCAAGTCATCCATAGGCCGTCTC
TTTGGCAAGAAAGAGAAGGGACGAATGGGACCCCCAGGCCGGGACAGCTCTTCTCTGGCTGGAACACCCT
CAGATGAGACACTGGCCACTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAG
GAACAAGAGGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCTGGGACGGG
CCCACCGTGGTGTCCTGGCTGGAGCTGTGGGTGGGCATGCCTGCCTGGTATGTGGCCGCCTGCCGGGCCA
ATGTCAAGAGCGGTGCCATCATGGCCAACCTGTCAGACACGGAGATCCAGCGCGAGATCGGCATCAGCAA
CCCGCTGCACCGACTCAAGCTACGCCTCGCCATCCAGGAGATGGTCTCGCTCACCTCGCCCTCAGCCCCC
GCCTCCTCCCGCACTTCCACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGA
CCAAGCCCGAGACCAAGGAGATCAGCTGGGAGCAGATCCTGGCATATGGCGACATGAACCACGAGTGGGT
GGGGAACGACTGGCTGCCCAGCCTGGGGCTGCCCCAATACCGCAGCTACTTCATGGAGTCGCTGGTGGAC
GCTCGAATGTTAGATCACCTTAACAAGAAGGAGCTCCGGGGCCAACTCAAGATGGTGGACAGCTTTCACA
GGGTGAGTCTACATTATGGGATTATGTGCCTGAAACGGCTCAACTATGACCGGAAGGACCTGGAGCGGAG
GCGGGAAGAAAGTCAGACCCAGATCCGAGACGTGATGGTGTGGTCCAATGAGCGGGTCATGGGTTGGGTG
TCCGGGCTGGGCCTGAAGGAATTTGCCACGAACCTCACGGAGAGCGGGGTACACGGGGCACTGCTCGCCC
TGGACGAGACCTTCGACTACTCCGACCTGGCCTTGCTCCTGCAGATCCCCACGCAGAATGCACAGGCCCG
GCAGCTTCTGGAGAAGGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGC
GCCAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGAGGCGTAACTC
CCGACTCAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCTGCAGCGGGAGCCCTGGGCTCTCCGGGGCT
CCCTCTCCGCAAGCTGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGG
ACCTATTCCTGCTAG

Translation (1194 aa):
MMCEVMPTISEDGRRGSALGPDEAGGELERLMVTMLTERERLLETLREAQDGLATAQLRLRELGHEKDSL
QRQLSIALPQEFAALTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQA
QSPGGVSSEVEVLKALKSLFEHHKALDEKVRERLRMALERVAVLEEELELSNQETLNLREQLSRRRSGLE
EPGKDGDGQTLANGLGPGGDSNRRTAELEEALERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKA
EEANSKLQRDLKEALAQREDMEERITTLEKRYLSAQREATSLHDANDKLENELASKESLYRQSEEKSRQL
AEWLDDAKQKLQQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQELQRARQRE
KMNDDHNKRLSETVDKLLSESNERLQLHLKERMGALEEKNSLSEEIANMKKLQDELLLNKEQLLAEMERM
QMEIDQLRGRPPSSYSRSLPGSALELRYSQAPTLPSGAHLDPYVAGSGRAGKRGRWSGVKEEPSKDWERS
APAGSIPPPFPGELDGSDEEEAEGMFGAELLSPSGQADVQTLAIMLQEQLEAINKEIKLIQEEKETTEQR
AEELESRVSSSGLDSLGRYRSSCSLPPSLTTSTLASPSPPSSGHSTPRLAPPSPAREGTDKANHVPKEEA
GAPRGEGPAIPGDTPPPTPRSARLERMTQALALQAGSLEDGGPPRGSEGTPDSLHKAPKKKSIKSSIGRL
FGKKEKGRMGPPGRDSSSLAGTPSDETLATDPLGLAKLTGPGDKDRRNKRKHELLEEACRQGLPFAAWDG
PTVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAP
ASSRTSTGNVWMTHEEMESLTATTKPETKEISWEQILAYGDMNHEWVGNDWLPSLGLPQYRSYFMESLVD
ARMLDHLNKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKDLERRREESQTQIRDVMVWSNERVMGWV
SGLGLKEFATNLTESGVHGALLALDETFDYSDLALLLQIPTQNAQARQLLEKEFSNLISLGTDRRLDEDS
AKSFSRSPSWRKMFREKDLRGVTPDSAEMLPPNFRSAAAGALGSPGLPLRKLQPEGQTSGSSRADGVSVR
TYSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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