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Report for CCDS12764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12764.1 Public Homo sapiens 19 SLC17A7 24 110 108 CCDS HistoryNCBI Gene:57030Re-query CCDS DB by CCDS ID:12764.1Re-query CCDS DB by GeneID:57030See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12764.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221485.8 ENSP00000221485.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221485.8Link to Ensembl Protein Viewer:ENSP00000221485.2Re-query CCDS DB by Nucleotide ID:ENST00000221485Re-query CCDS DB by Protein ID:ENSP00000221485
Original member Current member NCBI NM_020309.4 NP_064705.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020309.4Link to Protein Sequence:NP_064705.1Re-query CCDS DB by Nucleotide ID:NM_020309Re-query CCDS DB by Protein ID:NP_064705Link to BLAST:NP_064705.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064705.1 560 Q9P2U7-1 560 100% 0 0

Chromosomal Locations for CCDS 12764.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49430519 49430812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49431015 49431142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49431338 49431448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49432519 49432651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49432811 49432960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49433726 49433868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49433960 49434046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49434602 49434689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49434768 49434882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49435168 49435286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49436549 49436801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49441318 49441379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1683 nt):
ATGGAGTTCCGCCAGGAGGAGTTTCGGAAGCTAGCGGGTCGTGCTCTCGGGAAGCTGCACCGCCTTCTGG
AGAAGCGGCAGGAAGGCGCGGAGACGCTGGAGCTGAGTGCGGATGGGCGCCCGGTGACCACGCAGACCCG
GGACCCGCCGGTGGTGGACTGCACCTGCTTCGGCCTCCCTCGCCGCTACATTATCGCCATCATGAGTGGT
CTGGGCTTCTGCATCAGCTTTGGCATCCGCTGCAACCTGGGCGTGGCCATCGTCTCCATGGTCAATAACA
GCACGACCCACCGCGGGGGCCACGTGGTGGTGCAGAAAGCCCAGTTCAGCTGGGATCCAGAGACTGTCGG
CCTCATACACGGCTCCTTTTTCTGGGGCTACATTGTCACTCAGATTCCAGGAGGATTTATCTGTCAAAAA
TTTGCAGCCAACAGAGTTTTCGGCTTTGCTATTGTGGCAACATCCACTCTAAACATGCTGATCCCCTCAG
CTGCCCGCGTCCACTATGGCTGTGTCATCTTCGTGAGGATCCTGCAGGGGTTGGTAGAGGGGGTCACATA
CCCCGCCTGCCATGGGATCTGGAGCAAATGGGCCCCACCCTTAGAACGGAGTCGCCTGGCGACGACAGCC
TTTTGTGGTTCCTATGCTGGGGCGGTGGTCGCGATGCCCCTCGCCGGGGTCCTTGTGCAGTACTCAGGAT
GGAGCTCTGTTTTCTACGTCTACGGCAGCTTCGGGATCTTCTGGTACCTGTTCTGGCTGCTCGTCTCCTA
CGAGTCCCCCGCGCTGCACCCCAGCATCTCGGAGGAGGAGCGCAAGTACATCGAGGACGCCATCGGAGAG
AGCGCGAAACTCATGAACCCCCTCACGAAGTTTAGCACTCCCTGGCGGCGCTTCTTCACGTCTATGCCAG
TCTATGCCATCATCGTGGCCAACTTCTGCCGCAGCTGGACGTTCTACCTGCTGCTCATCTCCCAGCCCGC
CTACTTCGAAGAAGTGTTCGGCTTCGAGATCAGCAAGGTAGGCCTGGTGTCCGCGCTGCCCCACCTGGTC
ATGACCATCATCGTGCCCATCGGCGGCCAGATCGCGGACTTCCTGCGGAGCCGCCGCATCATGTCCACCA
CCAACGTGCGCAAGTTGATGAACTGCGGAGGCTTCGGCATGGAAGCCACGCTGCTGTTGGTGGTCGGCTA
CTCGCACTCCAAGGGCGTGGCCATCTCCTTCCTGGTCCTAGCCGTGGGCTTCAGCGGCTTCGCCATCTCT
GGGTTCAACGTGAACCACCTGGACATAGCCCCGCGCTACGCCAGCATCCTCATGGGCATCTCCAACGGCG
TGGGCACACTGTCGGGCATGGTGTGCCCCATCATCGTGGGGGCCATGACTAAGCACAAGACTCGGGAGGA
GTGGCAGTACGTGTTCCTAATTGCCTCCCTGGTGCACTATGGAGGTGTCATCTTCTACGGGGTCTTTGCT
TCTGGAGAGAAGCAGCCGTGGGCAGAGCCTGAGGAGATGAGCGAGGAGAAGTGTGGCTTCGTTGGCCATG
ACCAGCTGGCTGGCAGTGACGACAGCGAAATGGAGGATGAGGCTGAGCCCCCGGGGGCACCCCCTGCACC
CCCGCCCTCCTATGGGGCCACACACAGCACATTTCAGCCCCCCAGGCCCCCACCCCCTGTCCGGGACTAC
TGA

Translation (560 aa):
MEFRQEEFRKLAGRALGKLHRLLEKRQEGAETLELSADGRPVTTQTRDPPVVDCTCFGLPRRYIIAIMSG
LGFCISFGIRCNLGVAIVSMVNNSTTHRGGHVVVQKAQFSWDPETVGLIHGSFFWGYIVTQIPGGFICQK
FAANRVFGFAIVATSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTA
FCGSYAGAVVAMPLAGVLVQYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGE
SAKLMNPLTKFSTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLV
MTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLVLAVGFSGFAIS
GFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKHKTREEWQYVFLIASLVHYGGVIFYGVFA
SGEKQPWAEPEEMSEEKCGFVGHDQLAGSDDSEMEDEAEPPGAPPAPPPSYGATHSTFQPPRPPPPVRDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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