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Report for CCDS12923.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12923.1 Public Homo sapiens 19 IL11 24 110 108 CCDS HistoryNCBI Gene:3589Re-query CCDS DB by CCDS ID:12923.1Re-query CCDS DB by GeneID:3589See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12923.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264563.7 ENSP00000264563.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264563.7Link to Ensembl Protein Viewer:ENSP00000264563.1Re-query CCDS DB by Nucleotide ID:ENST00000264563Re-query CCDS DB by Protein ID:ENSP00000264563
Original member Current member EBI ENST00000585513.1 ENSP00000467355.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000585513.1Link to Ensembl Protein Viewer:ENSP00000467355.1Re-query CCDS DB by Nucleotide ID:ENST00000585513Re-query CCDS DB by Protein ID:ENSP00000467355
Original member Current member NCBI NM_000641.4 NP_000632.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000641.4Link to Protein Sequence:NP_000632.1Re-query CCDS DB by Nucleotide ID:NM_000641Re-query CCDS DB by Protein ID:NP_000632Link to BLAST:NP_000632.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000632.1 199 P20809-1 199 100% 0 0

Chromosomal Locations for CCDS 12923.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55366007 55366177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55368210 55368371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55368483 55368569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55368769 55368941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55370304 55370310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGAACTGTGTTTGCCGCCTGGTCCTGGTCGTGCTGAGCCTGTGGCCAGATACAGCTGTCGCCCCTGGGC
CACCACCTGGCCCCCCTCGAGTTTCCCCAGACCCTCGGGCCGAGCTGGACAGCACCGTGCTCCTGACCCG
CTCTCTCCTGGCGGACACGCGGCAGCTGGCTGCACAGCTGAGGGACAAATTCCCAGCTGACGGGGACCAC
AACCTGGATTCCCTGCCCACCCTGGCCATGAGTGCGGGGGCACTGGGAGCTCTACAGCTCCCAGGTGTGC
TGACAAGGCTGCGAGCGGACCTACTGTCCTACCTGCGGCACGTGCAGTGGCTGCGCCGGGCAGGTGGCTC
TTCCCTGAAGACCCTGGAGCCCGAGCTGGGCACCCTGCAGGCCCGACTGGACCGGCTGCTGCGCCGGCTG
CAGCTCCTGATGTCCCGCCTGGCCCTGCCCCAGCCACCCCCGGACCCGCCGGCGCCCCCGCTGGCGCCCC
CCTCCTCAGCCTGGGGGGGCATCAGGGCCGCCCACGCCATCCTGGGGGGGCTGCACCTGACACTTGACTG
GGCCGTGAGGGGACTGCTGCTGCTGAAGACTCGGCTGTGA

Translation (199 aa):
MNCVCRLVLVVLSLWPDTAVAPGPPPGPPRVSPDPRAELDSTVLLTRSLLADTRQLAAQLRDKFPADGDH
NLDSLPTLAMSAGALGALQLPGVLTRLRADLLSYLRHVQWLRRAGGSSLKTLEPELGTLQARLDRLLRRL
QLLMSRLALPQPPPDPPAPPLAPPSSAWGGIRAAHAILGGLHLTLDWAVRGLLLLKTRL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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