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Report for CCDS12950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12950.1 Public Homo sapiens 19 ZNF304 24 110 108 CCDS HistoryNCBI Gene:57343Re-query CCDS DB by CCDS ID:12950.1Re-query CCDS DB by GeneID:57343See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12950.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282286.6 ENSP00000282286.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282286.6Link to Ensembl Protein Viewer:ENSP00000282286.4Re-query CCDS DB by Nucleotide ID:ENST00000282286Re-query CCDS DB by Protein ID:ENSP00000282286
Original member Current member EBI ENST00000391705.7 ENSP00000375586.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391705.7Link to Ensembl Protein Viewer:ENSP00000375586.3Re-query CCDS DB by Nucleotide ID:ENST00000391705Re-query CCDS DB by Protein ID:ENSP00000375586
Original member Current member NCBI NM_020657.4 NP_065708.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020657.4Link to Protein Sequence:NP_065708.2Re-query CCDS DB by Nucleotide ID:NM_020657Re-query CCDS DB by Protein ID:NP_065708Link to BLAST:NP_065708.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065708.2 659 Q9HCX3 659 100% 0 0

Chromosomal Locations for CCDS 12950.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57351665 57351697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57353725 57353851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57356030 57357849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1980 nt):
ATGGCAGCGGCGGTGCTGATGGACCGGGTTCAGAGTTGTGTGACCTTCGAGGATGTGTTCGTGTACTTCT
CTCGGGAGGAGTGGGAACTCCTTGAGGAGGCACAGAGATTCCTGTACCGTGATGTGATGCTGGAGAACTT
TGCACTTGTGGCTACACTAGGTTTTTGGTGTGAAGCAGAACATGAGGCACCTTCTGAGCAGAGCGTTTCT
GTAGAAGGAGTGTCACAGGTCAGGACTGCTGAGTCAGGTCTTTTCCAGAAAGCACACCCATGTGAGATGT
GTGACCCACTCTTGAAAGACATTTTGCACCTGGCTGAACACCAGGGATCACACCTTACACAGAAACTGTG
CACACGTGGGCTGTGTAGGAGAAGATTCTCGTTCAGTGCAAACTTTTACCAGCACCAGAAGCAACATAAT
GGAGAGAATTGCTTCAGAGGGGATGATGGAGGGGCCTCATTTGTGAAGAGCTGTACAGTCCACATGTTAG
GGAGATCCTTTACGTGCAGGGAGGAAGGGATGGACTTACCAGATAGCTCTGGCCTTTTCCAGCACCAGAC
CACTTACAATAGGGTGAGTCCATGCAGAAGGACTGAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTC
AGGCAACACCAAGGAGACTATGATGGACAGATGCTTTTCAGTTGCGGTGATGAAGGGAAAGCCTTCCTGG
ACACCTTTACTCTTCTTGACAGCCAGATGACTCATGCTGAGGTGAGACCCTTCAGATGCCTACCATGTGG
AAATGTGTTCAAGGAGAAATCAGCTCTTATTAATCACAGAAAAATCCACAGTGGAGAAATATCTCATGTG
TGTAAGGAGTGTGGAAAAGCCTTCATTCACTTGCACCACCTAAAAATGCACCAGAAATTTCACACTGGAA
AAAGACACTATACATGCAGTGAATGTGGGAAGGCCTTCAGCCGCAAGGACACACTTGTTCAGCATCAGAG
AGTTCACACTGGAGAAAGATCTTATGACTGCAGTGAATGTGGAAAAGCCTACAGCAGAAGCTCCCACCTT
GTTCAGCACCAGAGAATTCACACAGGAGAAAGGCCTTATAAGTGCAACAAATGTGGGAAAGCCTTTAGCC
GTAAAGACACACTTGTTCAGCACCAGAGATTTCATACTGGAGAAAGGCCTTATGAGTGCAGTGAATGTGG
AAAATTCTTTAGCCAAAGCTCCCACCTTATTGAGCACTGGAGAATTCATACCGGGGCAAGGCCCTATGAA
TGCATAGAATGTGGAAAATTCTTTAGCCATAACTCTAGCCTCATTAAACATCGGAGAGTCCACACAGGAG
CAAGATCCTACGTGTGCAGCAAATGTGGGAAGGCCTTTGGCTGCAAAGACACACTTGTTCAGCACCAGAT
AATTCACACTGGAGCAAGGCCTTATGAGTGCAGTGAATGTGGGAAGGCCTTCAGCCGTAAAGACACACTT
GTGCAACACCAAAAAATCCACACTGGAGAAAGGCCTTATGAGTGTGGTGAATGTGGTAAATTCTTCAGCC
ATAGCTCCAACCTTATTGTACACCAGAGAATTCACACTGGAGCAAAGCCTTATGAGTGCAATGAATGTGG
GAAATGCTTTAGCCACAACTCCAGCCTCATTTTGCACCAGAGAGTTCACACAGGAGCAAGGCCTTATGTG
TGCAGTGAATGTGGGAAGGCTTACATTAGTAGCTCCCACCTTGTTCAACACAAGAAAGTTCACACTGGAG
CAAGACCTTATGAGTGCAGTGAATGTGGGAAATTCTTTAGCCGCAACTCTGGCCTCATTCTGCACCAGAG
GGTTCACACTGGAGAAAAGCCTTACGTATGCAGCGAATGTGGGAAAGCCTATAGCAGAAGCTCCCATCTT
GTTCGTCACCAGAAAGCTCACACTGGAGAAAGAGCTCACGAGTGCAACAGTTTTGGTGGCCCTTTAGCTG
CATCTCTTAAACTTGTTTAA

Translation (659 aa):
MAAAVLMDRVQSCVTFEDVFVYFSREEWELLEEAQRFLYRDVMLENFALVATLGFWCEAEHEAPSEQSVS
VEGVSQVRTAESGLFQKAHPCEMCDPLLKDILHLAEHQGSHLTQKLCTRGLCRRRFSFSANFYQHQKQHN
GENCFRGDDGGASFVKSCTVHMLGRSFTCREEGMDLPDSSGLFQHQTTYNRVSPCRRTECMESFPHSSSL
RQHQGDYDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCLPCGNVFKEKSALINHRKIHSGEISHV
CKECGKAFIHLHHLKMHQKFHTGKRHYTCSECGKAFSRKDTLVQHQRVHTGERSYDCSECGKAYSRSSHL
VQHQRIHTGERPYKCNKCGKAFSRKDTLVQHQRFHTGERPYECSECGKFFSQSSHLIEHWRIHTGARPYE
CIECGKFFSHNSSLIKHRRVHTGARSYVCSKCGKAFGCKDTLVQHQIIHTGARPYECSECGKAFSRKDTL
VQHQKIHTGERPYECGECGKFFSHSSNLIVHQRIHTGAKPYECNECGKCFSHNSSLILHQRVHTGARPYV
CSECGKAYISSSHLVQHKKVHTGARPYECSECGKFFSRNSGLILHQRVHTGEKPYVCSECGKAYSRSSHL
VRHQKAHTGERAHECNSFGGPLAASLKLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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