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Report for CCDS12972.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12972.1 Public Homo sapiens 19 ZNF329 24 110 108 CCDS HistoryNCBI Gene:79673Re-query CCDS DB by CCDS ID:12972.1Re-query CCDS DB by GeneID:79673See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12972.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358067.5 ENSP00000350773.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358067.5Link to Ensembl Protein Viewer:ENSP00000350773.4Re-query CCDS DB by Nucleotide ID:ENST00000358067Re-query CCDS DB by Protein ID:ENSP00000350773
Original member Current member EBI ENST00000500161.2 ENSP00000439527.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000500161.2Link to Ensembl Protein Viewer:ENSP00000439527.1Re-query CCDS DB by Nucleotide ID:ENST00000500161Re-query CCDS DB by Protein ID:ENSP00000439527
Original member Current member EBI ENST00000598312.6 ENSP00000470008.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000598312.6Link to Ensembl Protein Viewer:ENSP00000470008.1Re-query CCDS DB by Nucleotide ID:ENST00000598312Re-query CCDS DB by Protein ID:ENSP00000470008
Original member Current member EBI ENST00000597186.5 ENSP00000470323.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000597186.5Link to Ensembl Protein Viewer:ENSP00000470323.1Re-query CCDS DB by Nucleotide ID:ENST00000597186Re-query CCDS DB by Protein ID:ENSP00000470323
Original member Current member NCBI NM_024620.4 NP_078896.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024620.4Link to Protein Sequence:NP_078896.3Re-query CCDS DB by Nucleotide ID:NM_024620Re-query CCDS DB by Protein ID:NP_078896Link to BLAST:NP_078896.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078896.3 541 Q86UD4 541 100% 0 0

Chromosomal Locations for CCDS 12972.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58127878 58129503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGAGATTGAAAATGACGACTCGGAATTTTCCTGAGAGAGAAGTACCCTGTGATGTAGAAGTGGAAAGAT
TCACAAGGGAAGTTCCCTGCTTGTCCAGTTTAGGTGATGGTTGGGACTGTGAGAACCAGGAGGGACACTT
GAGGCAATCAGCTTTAACTCTGGAGAAACCAGGGACTCAGGAAGCAATTTGTGAATATCCTGGTTTTGGG
GAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCATGCAC
CTGACTCAAATGTTAGTGGTCTGGATTGTGACCCCGCCTTACCCAGCTATCCTAAAAGTTATGCAGATAA
GAGAACTGGTGACAGTGATGCCTGTGGAAAAGGCTTCAACCATTCCATGGAAGTTATTCATGGAAGAAAT
CCAGTGAGAGAGAAGCCCTACAAATACCCTGAAAGTGTTAAGTCTTTTAATCATTTTACCTCTCTTGGTC
ATCAGAAAATAATGAAAAGAGGCAAGAAATCGTATGAAGGTAAGAATTTTGAGAACATCTTTACTCTGAG
CTCATCGCTTAATGAAAACCAGAGAAATCTCCCTGGAGAGAAACAATATAGATGTACTGAATGTGGCAAA
TGCTTCAAACGGAACTCTTCTCTTGTTTTGCATCACCGAACTCACACCGGAGAGAAGCCTTATACTTGTA
ATGAGTGTGGAAAGTCCTTCTCCAAGAACTACAACCTGATTGTGCATCAAAGAATCCACACAGGAGAGAA
GCCCTATGAATGCAGTAAATGTGGGAAAGCTTTCAGTGATGGCTCAGCTCTGACACAGCACCAGAGAATT
CACACAGGCGAGAAACCTTATGAATGCCTAGAGTGTGGAAAAACCTTCAACCGAAATTCATCCTTAATTT
TGCACCAAAGAACTCATACAGGGGAAAAACCATATAGATGTAACGAATGTGGGAAACCCTTCACTGACAT
CTCCCACCTTACAGTGCATCTCAGAATCCACACCGGTGAGAAGCCCTATGAGTGTAGCAAATGTGGAAAG
GCTTTCCGGGACGGCTCGTACCTCACCCAGCATGAGAGGACTCACACTGGAGAAAAGCCCTTTGAGTGTG
CAGAGTGCGGGAAATCCTTCAACAGAAACTCTCACCTCATTGTGCATCAAAAGATCCATTCTGGGGAGAA
ACCCTATGAATGTAAAGAATGTGGCAAGACTTTCATCGAGAGTGCGTACCTCATCAGGCATCAGAGGATT
CATACTGGCGAGAAGCCCTATGGCTGCAACCAGTGTCAGAAACTTTTCAGGAATATCGCTGGCCTCATTA
GGCACCAGAGGACTCATACTGGTGAGAAGCCCTATGAGTGTAATCAGTGTGGCAAAGCCTTCAGGGACAG
CTCCTGTCTGACCAAGCACCAGAGAATTCACACTAAGGAGACCCCATATCAGTGTCCAGAATGTGGGAAG
TCCTTCAAGCAGAACTCTCACCTGGCAGTACATCAGAGACTCCATAGCAGGGAGGGTCCCAGCCGGTGTC
CTCAGTGTGGAAAAATGTTCCAAAAGAGCTCATCCCTTGTTCGACATCAAAGAGCACACCTGGGAGAGCA
ACCCATGGAAACATAA

Translation (541 aa):
MRLKMTTRNFPEREVPCDVEVERFTREVPCLSSLGDGWDCENQEGHLRQSALTLEKPGTQEAICEYPGFG
EHLIASSDLPPSQRVLATNGFHAPDSNVSGLDCDPALPSYPKSYADKRTGDSDACGKGFNHSMEVIHGRN
PVREKPYKYPESVKSFNHFTSLGHQKIMKRGKKSYEGKNFENIFTLSSSLNENQRNLPGEKQYRCTECGK
CFKRNSSLVLHHRTHTGEKPYTCNECGKSFSKNYNLIVHQRIHTGEKPYECSKCGKAFSDGSALTQHQRI
HTGEKPYECLECGKTFNRNSSLILHQRTHTGEKPYRCNECGKPFTDISHLTVHLRIHTGEKPYECSKCGK
AFRDGSYLTQHERTHTGEKPFECAECGKSFNRNSHLIVHQKIHSGEKPYECKECGKTFIESAYLIRHQRI
HTGEKPYGCNQCQKLFRNIAGLIRHQRTHTGEKPYECNQCGKAFRDSSCLTKHQRIHTKETPYQCPECGK
SFKQNSHLAVHQRLHSREGPSRCPQCGKMFQKSSSLVRHQRAHLGEQPMET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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