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Report for CCDS12974.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12974.1 Public Homo sapiens 19 ZNF8 24 110 108 CCDS HistoryNCBI Gene:7554Re-query CCDS DB by CCDS ID:12974.1Re-query CCDS DB by GeneID:7554See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12974.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621650.2 ENSP00000477716.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000621650.2Link to Ensembl Protein Viewer:ENSP00000477716.1Re-query CCDS DB by Nucleotide ID:ENST00000621650Re-query CCDS DB by Protein ID:ENSP00000477716
Original member Current member NCBI NM_021089.3 NP_066575.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021089.3Link to Protein Sequence:NP_066575.2Re-query CCDS DB by Nucleotide ID:NM_021089Re-query CCDS DB by Protein ID:NP_066575Link to BLAST:NP_066575.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066575.2 575 P17098 575 100% 0 0

Chromosomal Locations for CCDS 12974.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58279082 58279147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58285717 58285843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58286110 58286205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58294098 58295536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1728 nt):
ATGGACCCCGAGGACGAAGGGGTAGCGGGAGTGATGTCTGTGGGGCCGCCGGCGGCCCGGCTTCAGGAAC
CAGTGACCTTCCGGGATGTGGCTGTGGACTTTACCCAGGAGGAATGGGGGCAGCTGGACCCTACCCAGAG
GATCCTCTACCGTGACGTGATGCTGGAGACCTTTGGTCACCTGCTCTCCATAGGTCCTGAGCTTCCGAAG
CCTGAAGTCATCTCCCAGCTGGAGCAAGGGACCGAGCTATGGGTGGCTGAGAGAGGAACCACCCAGGGCT
GCCATCCAGCCTGGGAGCCTCGATCTGAAAGCCAAGCATCACGCAAGGAAGAGGGCCTGCCTGAAGAGGA
GCCATCCCATGTCACGGGAAGGGAAGGATTCCCGACAGATGCTCCTTATCCCACCACGTTAGGGAAAGAC
AGGGAGTGTCAGAGCCAGAGTCTGGCACTCAAGGAGCAGAATAACTTGAAGCAGTTGGAATTTGGCCTCA
AGGAAGCACCAGTTCAAGATCAAGGCTACAAAACTCTCAGACTCAGGGAAAACTGCGTCCTGAGTTCAAG
CCCAAATCCATTCCCAGAGATCTCTAGAGGGGAGTATTTGTATACTTACGACTCACAGATTACAGACTCA
GAACATAACTCCAGCTTAGTCAGTCAGCAGACAGGCTCCCCAGGAAAACAGCCCGGTGAAAACAGTGACT
GTCACAGAGATTCCAGTCAGGCCATTCCAATTACGGAACTCACAAAAAGCCAGGTGCAGGACAAACCCTA
CAAATGTACTGACTGTGGGAAGTCGTTTAACCATAACGCACACCTCACCGTGCACAAGAGGATTCATACG
GGAGAAAGACCTTATATGTGCAAGGAGTGTGGGAAAGCCTTCAGCCAGAACTCCTCCCTCGTCCAGCATG
AGCGCATCCACACTGGAGACAAGCCCTACAAGTGTGCCGAATGTGGGAAGTCTTTCTGCCATAGTACACA
CCTTACCGTCCATCGGAGGATTCACACTGGGGAGAAGCCCTATGAGTGTCAGGACTGTGGGAGGGCCTTC
AACCAGAACTCCTCCCTGGGGCGGCACAAGAGGACACACACTGGGGAGAAGCCATACACCTGCAGTGTGT
GTGGGAAATCCTTCTCTCGGACCACTTGCCTTTTCCTGCACCTGAGAACTCACACCGAGGAGAGGCCCTA
CGAGTGTAACCACTGCGGGAAGGGCTTCAGGCACAGCTCATCCCTGGCCCAGCACCAGCGGAAGCACGCG
GGGGAGAAGCCCTTTGAGTGCCGCCAGAGGCTGATCTTTGAGCAGACGCCAGCTCTCACAAAGCATGAAT
GGACAGAAGCCCTGGGCTGTGACCCACCTTTGAGTCAAGATGAGAGGACTCACCGAAGCGACAGACCCTT
CAAATGTAATCAGTGTGGGAAGTGTTTCATTCAGAGCTCTCACCTCATCCGGCACCAGATAACTCACACC
AGAGAGGAGCAGCCCCATGGGCGAAGCCGGCGGCGTGAACAATCCTCGAGCAGGAACTCACACCTGGTTC
AGCATCAACACCCGAACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCAGGGCAGCCGGAAAGCAGAGC
CCTGGCTTTGTTTGACATCCAAAAAATCATGCAAGAGAAAAACCCTGTGCACGTTATTGGGGTGGAAGAG
CCTTCTGTGGGTGCTTCCATGTTATTTGACATCAGAGAATCCACATAG

Translation (575 aa):
MDPEDEGVAGVMSVGPPAARLQEPVTFRDVAVDFTQEEWGQLDPTQRILYRDVMLETFGHLLSIGPELPK
PEVISQLEQGTELWVAERGTTQGCHPAWEPRSESQASRKEEGLPEEEPSHVTGREGFPTDAPYPTTLGKD
RECQSQSLALKEQNNLKQLEFGLKEAPVQDQGYKTLRLRENCVLSSSPNPFPEISRGEYLYTYDSQITDS
EHNSSLVSQQTGSPGKQPGENSDCHRDSSQAIPITELTKSQVQDKPYKCTDCGKSFNHNAHLTVHKRIHT
GERPYMCKECGKAFSQNSSLVQHERIHTGDKPYKCAECGKSFCHSTHLTVHRRIHTGEKPYECQDCGRAF
NQNSSLGRHKRTHTGEKPYTCSVCGKSFSRTTCLFLHLRTHTEERPYECNHCGKGFRHSSSLAQHQRKHA
GEKPFECRQRLIFEQTPALTKHEWTEALGCDPPLSQDERTHRSDRPFKCNQCGKCFIQSSHLIRHQITHT
REEQPHGRSRRREQSSSRNSHLVQHQHPNSRKSSAGGAKAGQPESRALALFDIQKIMQEKNPVHVIGVEE
PSVGASMLFDIREST


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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