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Report for CCDS1300.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1300.1 Public Homo sapiens 1 METTL13 24 110 108 CCDS HistoryNCBI Gene:51603Re-query CCDS DB by CCDS ID:1300.1Re-query CCDS DB by GeneID:51603See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1300.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000362019.7 ENSP00000355393.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000362019.7Link to Ensembl Protein Viewer:ENSP00000355393.3Re-query CCDS DB by Nucleotide ID:ENST00000362019Re-query CCDS DB by Protein ID:ENSP00000355393
Original member Current member NCBI NM_014955.3 NP_055770.1 Accepted alive Link to Nucleotide Sequence:NM_014955.3Link to Protein Sequence:NP_055770.1Re-query CCDS DB by Nucleotide ID:NM_014955Re-query CCDS DB by Protein ID:NP_055770Link to BLAST:NP_055770.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055770.1 613 Q8N6R0-3 613 100% 0 0

Chromosomal Locations for CCDS 1300.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 171783845 171784499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171785879 171786078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171787735 171787930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171790452 171790616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171792017 171792235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171794396 171794527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171796482 171796756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1842 nt):
ATGAAGGAATGTAATGCCACCCGACGGCCCCAGATGAGCTTCTTGAAGATGGACATGACGCAGATGGAGT
TTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCCTGACAGATGAGGAAGA
GAAGACCTTACAACAGGTGGACAGGATGCTGGCTGAGGTTGGCCGTGTCCTGCAGGTGGGCGGTCGCTAT
CTCTGCATCTCCCTGGCTCAGGCTCACATCCTGAAGAAAGCAGTGGGCCACTTCTCCCGGGAGGGGTGGA
TGGTGAGGGTGCACCAAGTGGCCAACAGCCAGGACCAGGTGTTGGAAGCAGAGCCTCAGTTCTCCTTGCC
TGTCTTTGCCTTCATCATGACCAAGTTCAGGCCAGTCCCTGGCTCTGCCCTTCAGATCTTTGAGCTGTGT
GCTCAGGAGCAGCGCAAGCCTGTGCGGCTGGAGAGTGCCGAGCGGCTGGCCGAGGCGGTGCAGGAGCGAC
AGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGCCAGGCTGGGGAGTGTGTCTCTGGACTTGTG
CGATGGGGACACGGGGGAGCCACGCTACACCCTCCACGTGGTGGACAGCCCCACTGTGAAACCATCGCGG
GACAATCATTTTGCGATTTTCATCATCCCTCAGGGCCGGGAGACCGAGTGGCTCTTTGGCATGGATGAGG
GCCGGAAACAGCTGGCGGCCAGTGCTGGCTTCAGGAGGTTGATTACAGTGGCCCTTCACCGAGGTCAGCA
GTATGAAAGCATGGACCACATCCAAGCTGAGCTGTCGGCTAGAGTCATGGAGCTGGCCCCAGCTGGGATG
CCCACCCAGCAGCAGGTCCCCTTTCTGTCTGTGGGTGGGGACATTGGGGTCCGGACCGTTCAGCACCAAG
ACTGCAGCCCCTTGAGCGGTGACTATGTCATTGAGGATGTGCAAGGGGATGACAAGCGATACTTCCGTCG
ACTGATCTTCCTCAGCAACAGGAATGTGGTGCAGTCCGAAGCCAGGTTGCTGAAGGATGTGTCTCACAAA
GCCCAGAAGAAGCGGAAAAAGGACAGGAAGAAGCAGCGGCCTGCTGATGCGGAGGACCTCCCTGCAGCCC
CGGGGCAGTCCATTGATAAGAGTTACCTGTGTTGTGAACACCACAAAGCCATGATCGCTGGCCTTGCCCT
GCTGAGAAACCCAGAGCTACTCCTAGAGATCCCACTGGCATTGTTGGTGGTAGGCCTGGGCGGGGGCAGC
CTCCCCCTCTTTGTCCACGATCATTTTCCAAAGTCCTGCATTGATGCTGTGGAGATCGATCCCTCCATGT
TGGAAGTGGCCACCCAGTGGTTTGGCTTCTCCCAGAGTGACCGAATGAAGGTCCACATTGCAGATGGCCT
GGACTATATCGCCAGCTTGGCAGGAGGAGGAGAAGCACGGCCTTGCTACGATGTCATAATGTTTGATGTT
GACAGTAAGGACCCAACACTGGGAATGAGTTGTCCGCCCCCAGCATTTGTGGAGCAATCTTTTCTACAGA
AGGTTAAAAGCATCTTGACTCCTGAAGGTGTTTTTATTCTCAACCTTGTGTGCCGAGACTTGGGGCTAAA
AGACTCAGTGCTGGCTGGGCTCAAGGCAGTGTTCCCCCTCCTATATGTCCGGCGAATTGAGGGTGAAGTG
AATGAGATCCTGTTCTGTCAGCTGCACCCTGAGCAAAAACTTGCCACACCAGAGCTCCTAGAAACAGCCC
AGGCTTTGGAGCGGACCCTGAGGAAGCCTGGGAGGGGTTGGGATGACACGTATGTCTTGTCAGATATGCT
CAAGACGGTGAAAATTGTGTGA

Translation (613 aa):
MKECNATRRPQMSFLKMDMTQMEFPDASFQVVLDKGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQVGGRY
LCISLAQAHILKKAVGHFSREGWMVRVHQVANSQDQVLEAEPQFSLPVFAFIMTKFRPVPGSALQIFELC
AQEQRKPVRLESAERLAEAVQERQQYAWLCSQLRRKARLGSVSLDLCDGDTGEPRYTLHVVDSPTVKPSR
DNHFAIFIIPQGRETEWLFGMDEGRKQLAASAGFRRLITVALHRGQQYESMDHIQAELSARVMELAPAGM
PTQQQVPFLSVGGDIGVRTVQHQDCSPLSGDYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHK
AQKKRKKDRKKQRPADAEDLPAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGS
LPLFVHDHFPKSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV
DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPLLYVRRIEGEV
NEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTVKIV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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