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Report for CCDS1320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1320.1 Public Homo sapiens 1 BRINP2 24 110 108 CCDS HistoryNCBI Gene:57795Re-query CCDS DB by CCDS ID:1320.1Re-query CCDS DB by GeneID:57795See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1320.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361539.5 ENSP00000354481.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361539.5Link to Ensembl Protein Viewer:ENSP00000354481.4Re-query CCDS DB by Nucleotide ID:ENST00000361539Re-query CCDS DB by Protein ID:ENSP00000354481
Original member Current member NCBI NM_021165.4 NP_066988.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021165.4Link to Protein Sequence:NP_066988.1Re-query CCDS DB by Nucleotide ID:NM_021165Re-query CCDS DB by Protein ID:NP_066988Link to BLAST:NP_066988.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066988.1 783 Q9C0B6-1 783 100% 0 0

Chromosomal Locations for CCDS 1320.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 177229877 177230145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177255919 177256109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177257176 177257384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177273488 177273593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177276198 177276434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177278563 177278785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177280412 177281528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2352 nt):
ATGAGGTGGCAGTGTGGCACTCGGTTTAGAGGGCTTCGGCCGGCGGTGGCCCCATGGACAGCCCTGCTGG
CACTGGGCCTGCCTGGCTGGGTGTTGGCTGTCTCAGCCACGGCGGCTGCTGTGGTCCCCGAGCAGCATGC
CTCCGTAGCTGGCCAGCATCCCCTGGACTGGCTGCTCACAGACCGGGGCCCCTTCCACCGCGCTCAGGAG
TATGCTGACTTCATGGAGCGGTACCGCCAGGGTTTCACCACCAGGTACAGGATTTATAGGGAGTTTGCCC
GTTGGAAGGTGAACAACTTGGCTCTGGAAAGGAAGGACTTCTTCAGTTTGCCATTGCCTCTTGCCCCAGA
GTTTATCCGGAACATTCGCCTCCTTGGAAGGAGACCCAATCTGCAACAGGTTACAGAAAATCTGATTAAA
AAGTACGGCACTCATTTCTTACTTTCTGCCACCCTTGGAGGAGAAGAGTCCCTGACCATTTTTGTGGACA
AGCAGAAACTGGGAAGAAAGACAGAGACAACAGGAGGTGCCTCTATAATCGGGGGCAGTGGGAACAGCAC
AGCTGTGTCCCTGGAGACCCTGCACCAGCTGGCCGCCTCCTACTTCATCGACAGAGAGAGCACGCTGCGA
CGGCTGCACCATATCCAGATAGCCACGGGGGCCATCAAGGTCACCGAGACCAGGACCGGTCCTCTGGGCT
GCAGCAACTATGACAATCTGGACTCAGTCAGTTCTGTCTTGGTACAGAGTCCAGAGAACAAAGTACAGTT
ACTTGGCCTTCAGGTGCTGCTGCCTGAGTATCTGCGTGAGCGCTTTGTAGCTGCAGCACTCAGCTACATC
ACATGCAGCTCTGAGGGTGAGCTCGTCTGCAAGGAGAATGACTGCTGGTGCAAGTGCAGCCCCACCTTCC
CTGAATGCAACTGCCCTGATGCTGACATCCAGGCCATGGAGGACAGCCTGCTGCAGATCCAGGACTCCTG
GGCCACTCACAACCGGCAGTTTGAAGAGTCAGAAGAGTTCCAGGCCCTGCTGAAAAGGCTGCCCGATGAC
CGGTTCCTGAACTCCACAGCTATCTCCCAGTTCTGGGCCATGGACACCAGCCTTCAGCACCGCTACCAGC
AGCTGGGAGCTGGCTTGAAAGTGCTGTTCAAAAAGACCCATCGGATCCTACGCCGGCTCTTCAACCTCTG
CAAGCGCTGCCATCGCCAGCCTCGCTTCCGCCTGCCCAAGGAGAGGTCCTTGTCCTACTGGTGGAACCGA
ATCCAGTCCCTCCTCTACTGTGGGGAAAGCACCTTTCCTGGCACTTTCCTGGAACAGAGCCACAGCTGCA
CCTGCCCCTATGACCAATCTTCCTGCCAGGGCCCCATCCCATGTGCCTTGGGCGAAGGGCCCGCGTGTGC
CCACTGTGCTCCAGACAATAGCACACGCTGTGGGAGCTGCAACCCGGGCTATGTGCTGGCCCAGGGGCTG
TGCCGGCCAGAGGTGGCCGAGTCCCTGGAAAACTTTCTTGGGCTGGAGACAGACTTGCAGGACCTGGAGC
TAAAGTACCTGCTGCAGAAGCAGGATAGCCGCATTGAGGTACACTCCATCTTCATCAGCAATGACATGCG
GCTGGGCAGCTGGTTTGACCCTTCCTGGAGGAAGCGCATGCTGCTCACCCTGAAGAGCAACAAGTACAAG
CCTGGGCTGGTGCACGTGATGTTGGCCTTGTCCTTGCAGATCTGTCTCACCAAGAACAGCACCCTGGAGC
CTGTCATGGCCATCTACGTCAACCCCTTTGGGGGCAGCCACTCTGAGAGCTGGTTCATGCCTGTGAATGA
GGGCAGCTTTCCTGACTGGGAAAGGACTAACGTGGATGCAGCTGCCCAGTGCCAAAACTGGACTATCACC
TTGGGGAATAGGTGGAAGACTTTCTTTGAGACAGTTCATGTTTACCTACGGAGCCGAATCAAGTCCCTGG
ATGACAGCTCCAATGAGACAATCTACTATGAGCCCCTGGAGATGACTGATCCCTCTAAGAATTTGGGTTA
CATGAAAATTAACACCTTGCAGGTCTTTGGCTACAGCCTGCCCTTTGACCCAGATGCTATCCGGGACTTA
ATTCTCCAGTTGGACTACCCATATACTCAAGGTTCCCAGGACTCTGCACTCTTGCAGCTCATTGAGCTCA
GGGACCGGGTGAACCAGCTTTCTCCACCTGGCAAAGTCCGACTTGACCTTTTCTCCTGCTTGCTCCGGCA
TCGGCTTAAGCTGGCCAACAATGAGGTGGGCAGGATCCAGTCCTCCCTGAGGGCTTTCAATTCTAAGCTG
CCAAACCCTGTGGAATATGAGACCGGCAAACTCTGTAGCTAA

Translation (783 aa):
MRWQCGTRFRGLRPAVAPWTALLALGLPGWVLAVSATAAAVVPEQHASVAGQHPLDWLLTDRGPFHRAQE
YADFMERYRQGFTTRYRIYREFARWKVNNLALERKDFFSLPLPLAPEFIRNIRLLGRRPNLQQVTENLIK
KYGTHFLLSATLGGEESLTIFVDKQKLGRKTETTGGASIIGGSGNSTAVSLETLHQLAASYFIDRESTLR
RLHHIQIATGAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKVQLLGLQVLLPEYLRERFVAAALSYI
TCSSEGELVCKENDCWCKCSPTFPECNCPDADIQAMEDSLLQIQDSWATHNRQFEESEEFQALLKRLPDD
RFLNSTAISQFWAMDTSLQHRYQQLGAGLKVLFKKTHRILRRLFNLCKRCHRQPRFRLPKERSLSYWWNR
IQSLLYCGESTFPGTFLEQSHSCTCPYDQSSCQGPIPCALGEGPACAHCAPDNSTRCGSCNPGYVLAQGL
CRPEVAESLENFLGLETDLQDLELKYLLQKQDSRIEVHSIFISNDMRLGSWFDPSWRKRMLLTLKSNKYK
PGLVHVMLALSLQICLTKNSTLEPVMAIYVNPFGGSHSESWFMPVNEGSFPDWERTNVDAAAQCQNWTIT
LGNRWKTFFETVHVYLRSRIKSLDDSSNETIYYEPLEMTDPSKNLGYMKINTLQVFGYSLPFDPDAIRDL
ILQLDYPYTQGSQDSALLQLIELRDRVNQLSPPGKVRLDLFSCLLRHRLKLANNEVGRIQSSLRAFNSKL
PNPVEYETGKLCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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