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Report for CCDS13476.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13476.1 Public Homo sapiens 20 ATP5F1E 24 110 108 CCDS HistoryNCBI Gene:514Re-query CCDS DB by CCDS ID:13476.1Re-query CCDS DB by GeneID:514See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13476.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000243997.8 ENSP00000243997.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000243997.8Link to Ensembl Protein Viewer:ENSP00000243997.3Re-query CCDS DB by Nucleotide ID:ENST00000243997Re-query CCDS DB by Protein ID:ENSP00000243997
Original member Current member EBI ENST00000395659.1 ENSP00000379019.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395659.1Link to Ensembl Protein Viewer:ENSP00000379019.1Re-query CCDS DB by Nucleotide ID:ENST00000395659Re-query CCDS DB by Protein ID:ENSP00000379019
Original member Current member EBI ENST00000395663.1 ENSP00000379023.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395663.1Link to Ensembl Protein Viewer:ENSP00000379023.1Re-query CCDS DB by Nucleotide ID:ENST00000395663Re-query CCDS DB by Protein ID:ENSP00000379023
Original member Current member NCBI NM_006886.4 NP_008817.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006886.4Link to Protein Sequence:NP_008817.1Re-query CCDS DB by Nucleotide ID:NM_006886Re-query CCDS DB by Protein ID:NP_008817Link to BLAST:NP_008817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008817.1 51 P56381 51 100% 0 0

Chromosomal Locations for CCDS 13476.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 59030306 59030429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 59032220 59032251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (156 nt):
ATGGTGGCCTACTGGAGACAGGCTGGACTCAGCTACATCCGATACTCCCAGATCTGTGCAAAAGCAGTGA
GAGATGCACTGAAGACAGAATTCAAAGCAAATGCTGAGAAGACTTCTGGCAGCAACGTAAAAATTGTGAA
AGTAAAGAAGGAATAA

Translation (51 aa):
MVAYWRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKIVKVKKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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