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Report for CCDS13626.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13626.1 |
Public |
Homo sapiens |
21 |
DNAJC28 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:54943](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13626.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:54943](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 21 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 13626.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000314399.3 |
ENSP00000320303.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000314399.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000320303.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000314399](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000320303](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000381947.4 |
ENSP00000371373.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000381947.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000371373.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000381947](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000371373](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000402202.1 |
ENSP00000385777.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000402202.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000385777.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000402202](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000385777](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000617313.4 |
ENSP00000479716.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000617313.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000479716.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000617313](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000479716](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001040192.3 |
NP_001035282.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001040192.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001035282.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001040192](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001035282](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001035282.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001320746.3 |
NP_001307675.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001320746.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001307675.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001320746](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001307675](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001307675.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_017833.5 |
NP_060303.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_017833.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_060303.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_017833](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_060303](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_060303.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 13626.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1167 nt): ATGAATACAATGTATGTGATGATGGCTCAGATCTTAAGATCTCACCTGATAAAGGCTACAGTGATTCCTA ATCGAGTGAAAATGCTTCCATATTTTGGTATCATTAGAAATAGAATGATGTCAACCCATAAATCCAAAAA GAAGATCAGAGAATATTATAGACTGCTGAACGTGGAGGAAGGATGCTCTGCAGATGAAGTCAGGGAATCT TTTCATAAGCTTGCCAAGCAATATCATCCTGACAGTGGCTCTAATACTGCTGATTCTGCAACATTTATAA GGATTGAAAAAGCTTATAGAAAGGTGCTCTCCCATGTGATAGAACAAACAAATGCCAGTCAGAGTAAAGG TGAAGAAGAAGAAGATGTAGAAAAATTCAAATATAAAACACCCCAACACCGACATTATTTAAGTTTTGAA GGTATTGGTTTTGGGACTCCAACTCAACGAGAGAAGCATTATAGGCAATTTAGGGCAGACCGTGCTGCTG AACAAGTGATGGAATATCAAAAGCAGAAACTACAAAGCCAGTATTTTCCTGATAGTGTAATTGTTAAAAA TATAAGACAGAGCAAACAGCAAAAGATAACGCAAGCTATAGAACGTTTAGTGGAGGACCTCATTCAAGAA TCCATGGCAAAAGGAGACTTTGACAATCTCAGTGGGAAAGGAAAACCTCTGAAAAAGTTTTCTGACTGTT CTTACATTGATCCCATGACTCACAACCTGAACCGAATACTGATCGATAATGGATACCAACCAGAATGGAT CCTTAAGCAAAAGGAAATAAGCGATACTATTGAGCAACTCAGAGAGGCAATTTTAGTGTCTAGGAAAAAA CTTGGGAATCCAATGACACCAACTGAAAAGAAACAGTGGAACCATGTTTGTGAGCAGTTTCAAGAAAACA TCAGAAAATTAAACAAGCGAATTAATGATTTTAATTTAATTGTTCCCATCCTGACCAGGCAAAAAGTCCA TTTTGATGCTCAGAAAGAAATTGTCAGAGCCCAGAAAATATACGAGACCCTTATAAAAACAAAAGAAGTC ACAGATAGAAACCCAAATAACCTTGATCAAGGAGAAGGAGAGAAAACACCTGAAATCAAGAAAGGTTTTT TAAACTGGATGAATCTGTGGAAATTTATTAAAATACGATCATTTTGA
Translation (388 aa): MNTMYVMMAQILRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKIREYYRLLNVEEGCSADEVRES FHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNASQSKGEEEEDVEKFKYKTPQHRHYLSFE GIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFPDSVIVKNIRQSKQQKITQAIERLVEDLIQE SMAKGDFDNLSGKGKPLKKFSDCSYIDPMTHNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKK LGNPMTPTEKKQWNHVCEQFQENIRKLNKRINDFNLIVPILTRQKVHFDAQKEIVRAQKIYETLIKTKEV TDRNPNNLDQGEGEKTPEIKKGFLNWMNLWKFIKIRSF
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