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Report for CCDS13867.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13867.1 Public Homo sapiens 22 CABP7 24 110 108 CCDS HistoryNCBI Gene:164633Re-query CCDS DB by CCDS ID:13867.1Re-query CCDS DB by GeneID:164633See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13867.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216144.4 ENSP00000216144.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216144.4Link to Ensembl Protein Viewer:ENSP00000216144.3Re-query CCDS DB by Nucleotide ID:ENST00000216144Re-query CCDS DB by Protein ID:ENSP00000216144
Original member Current member NCBI NM_182527.3 NP_872333.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182527.3Link to Protein Sequence:NP_872333.1Re-query CCDS DB by Nucleotide ID:NM_182527Re-query CCDS DB by Protein ID:NP_872333Link to BLAST:NP_872333.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872333.1 215 Q86V35 215 100% 0 0

Chromosomal Locations for CCDS 13867.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 29720425 29720533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29727662 29727805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29728630 29728742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29729055 29729208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29729442 29729569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (648 nt):
ATGCCGTTCCACCCGGTGACGGCGGCGTTGATGTACCGGGGCATCTACACCGTGCCCAACCTGCTGTCGG
AGCAGCGCCCGGTGGACATCCCGGAGGACGAGCTGGAGGAGATCCGAGAGGCCTTCAAGGTGTTTGACCG
TGACGGCAATGGCTTCATCTCCAAGCAGGAGCTGGGCACAGCCATGCGCTCACTGGGTTACATGCCCAAC
GAGGTGGAGCTGGAGGTCATCATCCAGCGGCTGGACATGGATGGTGATGGTCAAGTGGACTTTGAGGAGT
TTGTGACCCTTCTGGGACCCAAACTCTCCACCTCAGGGATCCCAGAGAAGTTCCATGGCACCGACTTTGA
TACTGTCTTCTGGAAGTGCGACATGCAGAAGCTGACGGTGGATGAGCTGAAGCGGCTGCTCTACGACACC
TTCTGCGAGCACCTGTCCATGAAGGACATAGAGAACATCATCATGACGGAGGAGGAGAGCCACCTGGGCA
CAGCCGAGGAGTGTCCCGTGGATGTGGAGACCTGCTCCAACCAGCAGATCCGCCAGACTTGCGTGCGCAA
GAGTCTCATCTGCGCCTTCGCCATCGCCTTCATCATCAGTGTCATGCTCATTGCGGCCAACCAGGTGCTG
CGCAGTGGCATGAAGTAG

Translation (215 aa):
MPFHPVTAALMYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPN
EVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDT
FCEHLSMKDIENIIMTEEESHLGTAEECPVDVETCSNQQIRQTCVRKSLICAFAIAFIISVMLIAANQVL
RSGMK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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