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Report for CCDS13883.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13883.1 Public Homo sapiens 22 DUSP18 24 110 108 CCDS HistoryNCBI Gene:150290Re-query CCDS DB by CCDS ID:13883.1Re-query CCDS DB by GeneID:150290See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13883.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334679.4 ENSP00000333917.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334679.4Link to Ensembl Protein Viewer:ENSP00000333917.3Re-query CCDS DB by Nucleotide ID:ENST00000334679Re-query CCDS DB by Protein ID:ENSP00000333917
Original member Current member EBI ENST00000377087.3 ENSP00000366291.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377087.3Link to Ensembl Protein Viewer:ENSP00000366291.3Re-query CCDS DB by Nucleotide ID:ENST00000377087Re-query CCDS DB by Protein ID:ENSP00000366291
Original member Current member EBI ENST00000404885.5 ENSP00000385463.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404885.5Link to Ensembl Protein Viewer:ENSP00000385463.1Re-query CCDS DB by Nucleotide ID:ENST00000404885Re-query CCDS DB by Protein ID:ENSP00000385463
Original member Current member EBI ENST00000407308.1 ENSP00000386063.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407308.1Link to Ensembl Protein Viewer:ENSP00000386063.1Re-query CCDS DB by Nucleotide ID:ENST00000407308Re-query CCDS DB by Protein ID:ENSP00000386063
Original member Current member NCBI NM_001304794.2 NP_001291723.1 Accepted alive Link to Nucleotide Sequence:NM_001304794.2Link to Protein Sequence:NP_001291723.1Re-query CCDS DB by Nucleotide ID:NM_001304794Re-query CCDS DB by Protein ID:NP_001291723Link to BLAST:NP_001291723.1
Original member Current member NCBI NM_001304795.2 NP_001291724.1 Accepted alive Link to Nucleotide Sequence:NM_001304795.2Link to Protein Sequence:NP_001291724.1Re-query CCDS DB by Nucleotide ID:NM_001304795Re-query CCDS DB by Protein ID:NP_001291724Link to BLAST:NP_001291724.1
Original member Current member NCBI NM_152511.5 NP_689724.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152511.5Link to Protein Sequence:NP_689724.3Re-query CCDS DB by Nucleotide ID:NM_152511Re-query CCDS DB by Protein ID:NP_689724Link to BLAST:NP_689724.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291723.1 188 Q8NEJ0 188 100% 0 0
NP_001291724.1 188 Q8NEJ0 188 100% 0 0
NP_689724.3 188 Q8NEJ0 188 100% 0 0

Chromosomal Locations for CCDS 13883.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 30663437 30664003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGACAGCACCCTCGTGTGCCTTCCCAGTTCAGTTCCGGCAGCCCTCAGTCAGCGGCCTCTCGCAGATAA
CCAAAAGCCTGTATATCAGCAATGGTGTGGCCGCCAACAACAAGCTCATGCTGTCTAGCAACCAGATCAC
CATGGTCATCAATGTCTCAGTGGAGGTAGTGAACACCTTGTATGAGGATATCCAGTACATGCAGGTACCT
GTGGCTGACTCCCCTAACTCACGTCTCTGTGACTTCTTTGACCCTATTGCTGACCATATCCACAGCGTGG
AGATGAAGCAGGGCCGTACTTTGCTGCACTGTGCTGCTGGTGTGAGCCGCTCAGCTGCCCTGTGCCTCGC
CTACCTCATGAAGTACCACGCCATGTCCCTGCTGGACGCCCACACGTGGACCAAGTCATGCCGGCCCATC
ATCCGACCCAACAGCGGCTTTTGGGAGCAGCTCATCCACTATGAGTTCCAATTGTTTGGCAAGAACACTG
TGCACATGGTCAGTTCCCCAGTGGGAATGATCCCTGACATCTATGAGAAGGAAGTCCGTTTGATGATTCC
ACTGTGA

Translation (188 aa):
MTAPSCAFPVQFRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVNTLYEDIQYMQVP
VADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPI
IRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIYEKEVRLMIPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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