NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS1395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1395.1 Public Homo sapiens 1 ATP6V1G3 24 110 108 CCDS HistoryNCBI Gene:127124Re-query CCDS DB by CCDS ID:1395.1Re-query CCDS DB by GeneID:127124See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1395.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281087.6 ENSP00000281087.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000281087.6Link to Ensembl Protein Viewer:ENSP00000281087.2Re-query CCDS DB by Nucleotide ID:ENST00000281087Re-query CCDS DB by Protein ID:ENSP00000281087
Original member Current member EBI ENST00000367382.6 ENSP00000356352.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367382.6Link to Ensembl Protein Viewer:ENSP00000356352.2Re-query CCDS DB by Nucleotide ID:ENST00000367382Re-query CCDS DB by Protein ID:ENSP00000356352
Original member Current member NCBI NM_001376861.1 NP_001363790.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001376861.1Link to Protein Sequence:NP_001363790.1Re-query CCDS DB by Nucleotide ID:NM_001376861Re-query CCDS DB by Protein ID:NP_001363790Link to BLAST:NP_001363790.1
Original member Current member NCBI NM_133262.3 NP_573569.1 Accepted alive Link to Nucleotide Sequence:NM_133262.3Link to Protein Sequence:NP_573569.1Re-query CCDS DB by Nucleotide ID:NM_133262Re-query CCDS DB by Protein ID:NP_573569Link to BLAST:NP_573569.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363790.1 118 Q96LB4-1 118 100% 0 0
NP_573569.1 118 Q96LB4-1 118 100% 0 0

Chromosomal Locations for CCDS 1395.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 198523391 198523564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 198529081 198529181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 198540569 198540650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGACAAGCCAGTCTCAGGGGATCCACCAGCTTCTTCAGGCAGAAAAACGGGCCAAGGACAAGCTAGAGG
AAGCCAAGAAGAGAAAAGGAAAGCGATTGAAGCAAGCCAAGGAGGAAGCAATGGTAGAAATTGACCAGTA
CAGAATGCAGAGAGATAAAGAGTTTCGACTAAAACAATCTAAGATAATGGGCTCTCAGAATAATCTCTCA
GATGAAATAGAAGAACAAACACTAGGGAAGATACAAGAACTTAATGGACACTACAATAAGTATATGGAAA
GTGTGATGAACCAGCTCTTGAGCATGGTCTGTGACATGAAACCAGAAATCCATGTGAACTACAGAGCCAC
CAACTAA

Translation (118 aa):
MTSQSQGIHQLLQAEKRAKDKLEEAKKRKGKRLKQAKEEAMVEIDQYRMQRDKEFRLKQSKIMGSQNNLS
DEIEEQTLGKIQELNGHYNKYMESVMNQLLSMVCDMKPEIHVNYRATN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH