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Report for CCDS14216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14216.1 Public Homo sapiens X MAGEB18 24 110 108 CCDS HistoryNCBI Gene:286514Re-query CCDS DB by CCDS ID:14216.1Re-query CCDS DB by GeneID:286514See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325250.2 ENSP00000314543.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325250.2Link to Ensembl Protein Viewer:ENSP00000314543.1Re-query CCDS DB by Nucleotide ID:ENST00000325250Re-query CCDS DB by Protein ID:ENSP00000314543
Original member Current member NCBI NM_173699.4 NP_775970.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173699.4Link to Protein Sequence:NP_775970.2Re-query CCDS DB by Nucleotide ID:NM_173699Re-query CCDS DB by Protein ID:NP_775970Link to BLAST:NP_775970.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775970.2 343 Q96M61 343 100% 0 0

Chromosomal Locations for CCDS 14216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 26138986 26140017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGCCTCGAGGTCAGAAGAGTAAGCTCCGTGCCCGTGAGAAACGCCACCAGGCTCGTTGTGAGAATCAGG
ATCTGGGAGCTACGCAGGCCACTGTGGCAGAAGGAGAGTCACCCTCCCCTGCCTATCTTCTCTTTGGTGA
CAGACCCCAGAATTTGCCTGCTGCTGAGACACCTAGCATCCCTGAAGCGCTTCAGGGAGCCCCATCCACC
ACCAATGCTATTGCACCTGTTTCATGCAGTTCAAATGAAGGTGCCAGCAGCCAAGATGAGAAAAGTCTAG
GTTCCTCAAGGGAAGCTGAGGGCTGGAAAGAAGATCCTTTAAACAAGAAAGTAGTGTCGCTGGTGCATTT
CTTGCTTCAGAAGTATGAAACGAAAGAGCCAATTACAAAGGGAGATATGATAAAGTTTGTTATCAGGAAG
GATAAGTGTCACTTCAATGAGATCCTCAAGAGAGCCTCTGAGCACATGGAGCTGGCACTTGGTGTTGATT
TGAAGGAAGTGGATCCCATCAGGCACTACTATGCCTTTTTCAGCAAATTAGACCTCACCTATGATGAAAC
AACCAGTGATGAAGAAAAAATTCCCAAGACTGGCCTCCTGATGATTGCACTGGGTGTGATCTTTCTGAAT
GGCAACCGTGCCCCAGAAGAGGCAGTCTGGGAAATTATGAATATGATGGGTGTATATGCCGATAGGAAGC
ACTTCCTCTATGGGGATCCCAGGAAGGTCATGACCAAAGATTTGGTGCAGCTAAAGTACCTGGAGTACCA
GCAAGTGCCCAACAGTGATCCTCCACGCTATGAATTCCTGTGGGGTCCAAGAGCTCACGCTGAAACTAGC
AAGATGAAAGTCCTGGAGTTTGTAGCCAAGATACATGATACCGTCCCTAGTGCCTTCCCATCCTGCTATG
AAGAGGCTTTGAGGGATGAGGAACAGAGAACCCAAGCCAGAGCTGCAGCCAGGGCTCATACTGCTGCCAT
GGCAAATGCACGTTCCAGAACCACGTCTAGCAGCTTCTCCCATGCTAAGTGA

Translation (343 aa):
MPRGQKSKLRAREKRHQARCENQDLGATQATVAEGESPSPAYLLFGDRPQNLPAAETPSIPEALQGAPST
TNAIAPVSCSSNEGASSQDEKSLGSSREAEGWKEDPLNKKVVSLVHFLLQKYETKEPITKGDMIKFVIRK
DKCHFNEILKRASEHMELALGVDLKEVDPIRHYYAFFSKLDLTYDETTSDEEKIPKTGLLMIALGVIFLN
GNRAPEEAVWEIMNMMGVYADRKHFLYGDPRKVMTKDLVQLKYLEYQQVPNSDPPRYEFLWGPRAHAETS
KMKVLEFVAKIHDTVPSAFPSCYEEALRDEEQRTQARAAARAHTAAMANARSRTTSSSFSHAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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