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Report for CCDS14221.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14221.1 Public Homo sapiens X MAGEB4 24 110 108 CCDS HistoryNCBI Gene:4115Re-query CCDS DB by CCDS ID:14221.1Re-query CCDS DB by GeneID:4115See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14221.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378982.4 ENSP00000368266.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378982.4Link to Ensembl Protein Viewer:ENSP00000368266.2Re-query CCDS DB by Nucleotide ID:ENST00000378982Re-query CCDS DB by Protein ID:ENSP00000368266
Original member Current member NCBI NM_002367.4 NP_002358.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002367.4Link to Protein Sequence:NP_002358.1Re-query CCDS DB by Nucleotide ID:NM_002367Re-query CCDS DB by Protein ID:NP_002358Link to BLAST:NP_002358.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002358.1 346 O15481 346 100% 0 0

Chromosomal Locations for CCDS 14221.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 30242136 30243176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1041 nt):
ATGCCTCGGGGTCAGAAGAGTAAGCTCCGTGCCCGTGAGAAACGCCAGCGGACCCGTGGTCAGACCCAGG
ATCTCAAGGTTGGTCAGCCTACTGCAGCAGAGAAAGAAGAGTCTCCTTCCTCTTCCTCATCTGTTTTGAG
GGATACTGCCTCCAGCTCCCTTGCTTTTGGCATTCCCCAGGAGCCTCAGAGAGAGCCACCCACCACCTCT
GCTGCTGCAGCTATGTCATGCACTGGATCTGATAAAGGCGACGAGAGCCAAGATGAGGAAAATGCAAGTT
CCTCCCAGGCCTCAACATCCACTGAGAGATCACTCAAAGATTCTCTAACCAGGAAGACGAAGATGTTAGT
GCAGTTCCTGCTGTACAAGTATAAAATGAAAGAGCCCACTACAAAGGCAGAAATGCTGAAGATCATCAGC
AAAAAGTACAAGGAGCACTTCCCTGAGATCTTCAGGAAAGTCTCTCAGCGCACGGAGCTGGTCTTTGGCC
TTGCCTTGAAGGAGGTCAACCCCACCACTCACTCCTACATCCTCGTCAGCATGCTAGGCCCCAACGATGG
AAACCAGAGCAGTGCCTGGACCCTTCCAAGGAATGGGCTTCTGATGCCTCTACTGAGTGTGATCTTCTTA
AATGGCAACTGTGCCCGTGAAGAGGAAATCTGGGAATTCCTGAATATGCTGGGGATCTATGATGGAAAGA
GGCACCTTATCTTTGGGGAACCCCGAAAGCTCATCACCCAAGATCTGGTACAGGAAAAATATCTGGAATA
CCAGCAGGTGCCCAACAGTGATCCCCCACGCTATCAATTCCTGTGGGGTCCAAGAGCTCATGCAGAAACC
AGCAAGATGAAAGTCCTGGAGTTTTTGGCCAAGGTGAATGACACCACCCCCAATAACTTCCCACTGCTTT
ATGAAGAGGCTTTGAGAGATGAAGAAGAGAGAGCTGGAGCCCGGCCCAGAGTTGCAGCCAGGCGTGGCAC
TACAGCCATGACTAGTGCGTATTCCAGGGCCACATCCAGTAGCTCTTCCCAACCCATGTGA

Translation (346 aa):
MPRGQKSKLRAREKRQRTRGQTQDLKVGQPTAAEKEESPSSSSSVLRDTASSSLAFGIPQEPQREPPTTS
AAAAMSCTGSDKGDESQDEENASSSQASTSTERSLKDSLTRKTKMLVQFLLYKYKMKEPTTKAEMLKIIS
KKYKEHFPEIFRKVSQRTELVFGLALKEVNPTTHSYILVSMLGPNDGNQSSAWTLPRNGLLMPLLSVIFL
NGNCAREEEIWEFLNMLGIYDGKRHLIFGEPRKLITQDLVQEKYLEYQQVPNSDPPRYQFLWGPRAHAET
SKMKVLEFLAKVNDTTPNNFPLLYEEALRDEEERAGARPRVAARRGTTAMTSAYSRATSSSSSQPM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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